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4C1U
Asym. Unit
Info
Asym.Unit (127 KB)
Biol.Unit 1 (123 KB)
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(1)
Title
:
STRUCTURE OF THE XYLO-OLIGOSACCHARIDE SPECIFIC SOLUTE BINDING PROTEIN FROM BIFIDOBACTERIUM ANIMALIS SUBSP. LACTIS BL-04 IN COMPLEX WITH ARABINOXYLOBIOSE
Authors
:
F. Fredslund, M. Ejby, A. Vujicic-Zagar, B. Svensson, D. J. Slotboom, M. Abou Hachem
Date
:
13 Aug 13 (Deposition) - 30 Oct 13 (Release) - 11 Dec 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Transport Protein, Solute Binding Protein, Probiotic, Prebiotic, Arabinoxylobiose, Abc Transport
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Reference
:
M. Ejby, F. Fredslund, A. Vujicic-Zagar, B. Svensson, D. J. Slotboom, M. Abou Hachem
Structural Basis For Arabinoxylo-Oligosaccharide Capture By The Probiotic Bifidobacterium Animalis Subsp. Lactis Bl-04
Mol. Microbiol. V. 90 1100 2013
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Hetero Components
(3, 7)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
1b: PENTAETHYLENE GLYCOL (1PEb)
1c: PENTAETHYLENE GLYCOL (1PEc)
1d: PENTAETHYLENE GLYCOL (1PEd)
2a: ALPHA-L-ARABINOFURANOSE (AHRa)
3a: BETA-D-XYLOPYRANOSE (XYPa)
3b: BETA-D-XYLOPYRANOSE (XYPb)
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No.
Name
Count
Type
Full Name
1
1PE
4
Ligand/Ion
PENTAETHYLENE GLYCOL
2
AHR
1
Ligand/Ion
ALPHA-L-ARABINOFURANOSE
3
XYP
2
Ligand/Ion
BETA-D-XYLOPYRANOSE
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:192 , ASP A:220 , HIS A:221 , THR A:250 , THR A:252 , GLN A:419 , ALA A:422 , GLN A:423 , HOH A:2129 , HOH A:2147
BINDING SITE FOR RESIDUE 1PE A1429
2
AC2
SOFTWARE
PRO A:86 , LYS A:102 , ILE A:105 , ASP A:106 , GLY A:108 , PRO A:324 , LYS A:325 , HOH A:2047
BINDING SITE FOR RESIDUE 1PE A1430
3
AC3
SOFTWARE
GLU A:170 , ALA A:174 , LYS A:177 , GLU A:237 , LEU A:241
BINDING SITE FOR RESIDUE 1PE A1431
4
AC4
SOFTWARE
GLU A:57 , PRO A:61 , GLY A:62 , THR A:63 , LYS A:64 , HOH A:2019
BINDING SITE FOR RESIDUE 1PE A1432
5
AC5
SOFTWARE
ASN A:39 , ASN A:72 , SER A:144 , GLU A:146 , TRP A:195 , HIS A:199 , GLN A:254 , TRP A:277 , THR A:318 , TYR A:346 , TRP A:384 , ASP A:386 , HOH A:2035 , HOH A:2051 , HOH A:2058 , HOH A:2195 , HOH A:2202 , HOH A:2217 , HOH A:2219
BINDING SITE FOR POLY-SACCHARIDE RESIDUES AHR A1426 THROUGH XYP A1428
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SAPs(SNPs)/Variants
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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