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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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4C0C
Asym. Unit
Info
Asym.Unit (87 KB)
Biol.Unit 1 (233 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TRYPANOSOMA CRUZI CYP51 BOUND TO THE INHIBITOR (R)-N-(3-(1H-INDOL-3-YL)-1-OXO-1-(PYRIDIN-4-YLAMINO)PROPAN-2-YL)-4-(4-(2,4-DIFLUOROPHENYL)PIPERAZIN-1-YL)-2-FLUOROBENZAMIDE.
Authors
:
C. M. Calvet, D. F. Vieira, J. Y. Choi, M. D. Cameron, J. Gut, D. Kellar, J. L. Siqueira-Neto, J. H. Mckerrow, W. R. Roush, L. M. Podust
Date
:
01 Aug 13 (Deposition) - 20 Aug 14 (Release) - 10 Sep 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.04
Chains
:
Asym. Unit : A
Biol. Unit 1: A (3x)
Keywords
:
Oxidoreductase, Sterol Biosynthesis, Chagas Disease
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. M. Calvet, D. F. Vieira, J. Y. Choi, D. Kellar, M. D. Cameron, J. L. Siqueira-Neto, J. Gut, J. B. Johnston, L. Lin, S. Khan, J. H. Mckerrow, W. R. Roush, L. M. Podust
4-Aminopyridyl-Based Cyp51 Inhibitors As Anti-Trypanosoma Cruzi Drug Leads With Improved Pharmacokinetic Profile And In Vivo Potency.
J. Med. Chem. V. 57 6989 2014
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Hetero Components
(4, 17)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
3j: SULFATE ION (SO4j)
3k: SULFATE ION (SO4k)
3l: SULFATE ION (SO4l)
3m: SULFATE ION (SO4m)
4a: 4-[4-[2,4-BIS(FLUORANYL)PHENYL]PIP... (WVHa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
2
Ligand/Ion
GLYCEROL
2
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
3
SO4
13
Ligand/Ion
SULFATE ION
4
WVH
1
Ligand/Ion
4-[4-[2,4-BIS(FLUORANYL)PHENYL]PIPERAZIN-1-YL]-2-FLUORANYL-N-[(2R)-3-(1H-INDOL-3-YL)-1-OXIDANYLIDENE-1-(PYRIDIN-4-YLAMINO)PROPAN-2-YL]BENZAMIDE
[
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:90 , TYR A:116 , LEU A:134 , ALA A:288 , ALA A:291 , GLY A:292 , THR A:295 , SER A:296 , THR A:299 , LEU A:356 , ARG A:361 , GLY A:414 , PHE A:415 , GLY A:416 , ALA A:417 , HIS A:420 , LYS A:421 , CYS A:422 , ILE A:423 , GLY A:424 , WVH A:1460 , GOL A:1491 , HOH A:2091
BINDING SITE FOR RESIDUE HEM A1450
02
AC2
SOFTWARE
PHE A:48 , ILE A:70 , ILE A:72 , TYR A:103 , MET A:106 , TYR A:116 , ALA A:291 , MET A:460 , VAL A:461 , HEM A:1450 , HOH A:2029
BINDING SITE FOR RESIDUE WVH A1460
03
AC3
SOFTWARE
GLY A:111 , GLU A:112 , ARG A:230 , ARG A:233 , HIS A:279
BINDING SITE FOR RESIDUE SO4 A1479
04
AC4
SOFTWARE
GLN A:140 , ASN A:141 , PRO A:144 , ASN A:331 , TYR A:332
BINDING SITE FOR RESIDUE SO4 A1480
05
AC5
SOFTWARE
HIS A:306 , HIS A:309 , LYS A:311 , ASN A:312 , TRP A:400 , VAL A:452
BINDING SITE FOR RESIDUE SO4 A1481
06
AC6
SOFTWARE
SER A:277 , LEU A:278 , SO4 A:1488 , HOH A:2120
BINDING SITE FOR RESIDUE SO4 A1482
07
AC7
SOFTWARE
ASP A:409 , ALA A:417 , GLY A:418 , LYS A:421
BINDING SITE FOR RESIDUE SO4 A1483
08
AC8
SOFTWARE
ARG A:347 , PHE A:412 , LYS A:421 , GLN A:425 , HOH A:2105
BINDING SITE FOR RESIDUE SO4 A1484
09
AC9
SOFTWARE
TYR A:35 , GLN A:47 , ARG A:58 , HOH A:2114
BINDING SITE FOR RESIDUE SO4 A1493
10
BC1
SOFTWARE
GLN A:47 , ARG A:58
BINDING SITE FOR RESIDUE SO4 A1485
11
BC2
SOFTWARE
GLY A:185 , GLU A:186 , HOH A:2051 , HOH A:2121
BINDING SITE FOR RESIDUE SO4 A1486
12
BC3
SOFTWARE
ASN A:193 , ARG A:195 , HIS A:196
BINDING SITE FOR RESIDUE SO4 A1487
13
BC4
SOFTWARE
HIS A:279 , SO4 A:1482 , HOH A:2068 , HOH A:2120
BINDING SITE FOR RESIDUE SO4 A1488
14
BC5
SOFTWARE
ARG A:352 , ASP A:353 , HIS A:389 , TYR A:457
BINDING SITE FOR RESIDUE SO4 A1489
15
BC6
SOFTWARE
PRO A:222 , LEU A:223 , SER A:226
BINDING SITE FOR RESIDUE SO4 A1490
16
BC7
SOFTWARE
ILE A:175 , ALA A:179 , ALA A:288 , MET A:289 , GLY A:292 , GLN A:293 , PHE A:427 , GLN A:431 , HEM A:1450 , HOH A:2076
BINDING SITE FOR RESIDUE GOL A1491
17
BC8
SOFTWARE
ARG A:93 , ASN A:94 , GLU A:95 , TYR A:120
BINDING SITE FOR RESIDUE GOL A1492
[
close Site info
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_CP51_TRYCC_001 (D62E, chain A, )
2: VAR_CP51_TRYCC_002 (A117S, chain A, )
3: VAR_CP51_TRYCC_003 (E160K, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_CP51_TRYCC_001
*
D
62
E
CP51_TRYCC
---
---
A
D
62
E
2
UniProt
VAR_CP51_TRYCC_002
*
A
117
S
CP51_TRYCC
---
---
A
A
117
S
3
UniProt
VAR_CP51_TRYCC_003
*
E
160
K
CP51_TRYCC
---
---
A
E
160
K
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: CYTOCHROME_P450 (A:415-424)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CYTOCHROME_P450
PS00086
Cytochrome P450 cysteine heme-iron ligand signature.
CP51_TRYCC
415-424
1
A:415-424
[
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Protein
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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