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4BVW
Biol. Unit 2
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Asym.Unit (36 KB)
Biol.Unit 1 (16 KB)
Biol.Unit 2 (17 KB)
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(1)
Title
:
IDENTIFICATION OF SMALL MOLECULE INHIBITORS SELECTIVE FOR APO(A) KRINGLES KIV-7, KIV-10 AND KV.
Authors
:
J. Sandmark, M. Althage, G. M. K. Andersson, T. Antonsson, S. Blaho, C. B J. Bostrom, Y. Chen, A. Dahlen, P. O. Eriksson, E. Evertsson, T. Fex, O. Fjellstrom, D. Gustafsson, C. Hallberg, R. Hicks, E. Jarkvist, C. J I. Kalies, D. Kang, B. Svalstedt Karlsson, F. Kartberg, A. Legnehed, A. M. Lindqvist, S. A. Martinsson, A. Moberg, A. U. Petersson, M. Ridde A. Thelin, A. Tigerstrom, J. Vinblad, B. Xu, W. Knecht
Date
:
28 Jun 13 (Deposition) - 16 Jul 14 (Release) - 16 Jul 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrolase, Cardiovascular Disease, Drug Discovery, Optical Biosensors
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Sandmark, M. Althage, G. M. K. Andersson, T. Antonsson, S. Blaho, C. Bodin, J. Bostrom, Y. Chen, A. Dahlen, P. O. Eriksson, E. Evertsson, T. Fex, O. Fjellstrom, D. Gustafsson, C. Hallberg, R. Hicks, E. Jarkvist, C. Johansson, I. Kalies, D. Kang, B. Svalstedt Karlsson F. Kartberg, A. Legnehed, A. M. Lindqvist, S. A. Martinsson, A. Moberg A. U. Petersson, M. Ridderstrom, A. Thelin, A. Tigerstrom, J. Vinblad B. Xu, W. Knecht
Small Molecules Used To Decipher The Pathophysiological Roles Of The Kringle Domains Kiv-7, - 10 And Kv Of Apolipoprotein(A)
To Be Published
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
2a: 1,2-ETHANEDIOL (EDOa)
3a: 1,2,3,4-TETRAHYDROISOQUINOLINE-6-C... (HKYa)
3b: 1,2,3,4-TETRAHYDROISOQUINOLINE-6-C... (HKYb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
3
HKY
1
Ligand/Ion
1,2,3,4-TETRAHYDROISOQUINOLINE-6-CARBOXYLICACID
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Sites
(4, 4)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC4 (SOFTWARE)
3: AC5 (SOFTWARE)
4: AC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
TYR B:40 , PRO B:41 , ASN B:42 , GLY B:43
BINDING SITE FOR RESIDUE CL B1079
2
AC4
SOFTWARE
TYR B:2 , GLN B:77
BINDING SITE FOR RESIDUE CL B1080
3
AC5
SOFTWARE
ARG A:20 , TYR B:2 , ILE B:57 , GLN B:77
BINDING SITE FOR RESIDUE EDO B1081
4
AC7
SOFTWARE
ASP B:54 , GLU B:56 , TRP B:60 , TYR B:62 , ARG B:69 , TRP B:70 , HOH B:2051
BINDING SITE FOR RESIDUE HKY B1082
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: KRINGLE_2 (B:0-78|-|-|-|-)
2: KRINGLE_1 (B:49-61|-|-|-|-)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
KRINGLE_2
PS50070
Kringle domain profile.
APOA_HUMAN
27-105
141-219
255-333
369-447
483-561
597-675
711-789
825-903
939-1017
1053-1131
1167-1245
1281-1359
1395-1473
1509-1587
1623-1701
1737-1815
1851-1929
1965-2043
2079-2157
2193-2271
2307-2385
2421-2499
2535-2613
2649-2727
2763-2841
2877-2955
2991-3069
3105-3183
3219-3297
3333-3411
3447-3525
3561-3639
3675-3753
3781-3859
3895-3973
4009-4087
4123-4201
4227-4307
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
B:0-78
-
-
-
-
2
KRINGLE_1
PS00021
Kringle domain signature.
APOA_HUMAN
76-88
190-202
304-316
418-430
532-544
646-658
760-772
874-886
988-1000
1102-1114
1216-1228
1330-1342
1444-1456
1558-1570
1672-1684
1786-1798
1900-1912
2014-2026
2128-2140
2242-2254
2356-2368
2470-2482
2584-2596
2698-2710
2812-2824
2926-2938
3040-3052
3154-3166
3268-3280
3382-3394
3496-3508
3610-3622
3724-3736
3830-3842
3944-3956
4058-4070
4172-4184
4277-4290
1
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
B:49-61
-
-
-
-
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (36 KB)
Header - Asym.Unit
Biol.Unit 1 (16 KB)
Header - Biol.Unit 1
Biol.Unit 2 (17 KB)
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