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4BV5
Asym. Unit
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Asym.Unit (33 KB)
Biol.Unit 1 (15 KB)
Biol.Unit 2 (15 KB)
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(1)
Title
:
IDENTIFICATION OF SMALL MOLECULE INHIBITORS SELECTIVE FOR APO(A) KRINGLES KIV-7, KIV-10 AND KV.
Authors
:
J. Sandmark, M. Althage, G. M. K. Andersson, T. Antonsson, S. Blaho, C. B J. Bostrom, Y. Chen, A. Dahlen, P. O. Eriksson, E. Evertsson, T. Fex, O. Fjellstrom, D. Gustafsson, C. Hallberg, R. Hicks, E. Jarkvist, C. J I. Kalies, D. Kang, B. Svalstedt Karlsson, F. Kartberg, A. Legnehed, A. M. Lindqvist, S. A. Martinsson, A. Moberg, A. U. Petersson, M. Ridde A. Thelin, A. Tigerstrom, J. Vinblad, B. Xu, W. Knecht
Date
:
25 Jun 13 (Deposition) - 09 Jul 14 (Release) - 09 Jul 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hydrolase, Cardiovascular Disease, Optical Biosensors
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Sandmark, M. Althage, G. M. K. Andersson, T. Antonsson, S. Blaho, C. Bodin, J. Bostrom, Y. Chen, A. Dahlen, P. O. Eriksson, E. Evertsson, T. Fex, O. Fjellstrom, D. Gustafsson, C. Hallberg, R. Hicks, E. Jarkvist, C. Johansson, I. Kalies, D. Kang, B. Svalstedt Karlsson F. Kartberg, A. Legnehed, A. M. Lindqvist, S. A. Martinsson, A. Moberg A. U. Petersson, M. Ridderstrom, A. Thelin, A. Tigerstrom, J. Vinblad B. Xu, W. Knecht
Small Molecules Used To Decipher The Pathophysiological Roles Of The Kringle Domains Kiv-7, - 10 And Kv Of Apolipoprotein(A)
To Be Published
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: 4-(AMINOMETHYL)-N-(BENZENESULFONYL... (5C3a)
1b: 4-(AMINOMETHYL)-N-(BENZENESULFONYL... (5C3b)
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No.
Name
Count
Type
Full Name
1
5C3
2
Ligand/Ion
4-(AMINOMETHYL)-N-(BENZENESULFONYL)CYCLOHEXANECARBOXAMIDE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:33 , GLN A:34 , ARG A:35 , ASP A:55 , ASP A:57 , TRP A:62 , PHE A:64 , ARG A:71 , TRP A:72 , ASP B:67 , PRO B:68 , SER B:69
BINDING SITE FOR RESIDUE 5C3 A1081
2
AC2
SOFTWARE
ASP A:67 , PRO A:68 , SER A:69 , HIS B:33 , GLN B:34 , ARG B:35 , ASP B:55 , ASP B:57 , TRP B:62 , ARG B:71 , TRP B:72
BINDING SITE FOR RESIDUE 5C3 B1081
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SAPs(SNPs)/Variants
(2, 4)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_047299 (M66T, chain A/B, )
2: VAR_006633 (W72R, chain A/B, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_047299
M
4187
T
APOA_HUMAN
Polymorphism
1801693
A/B
M
66
T
2
UniProt
VAR_006633
W
4193
R
APOA_HUMAN
Unclassified
---
A/B
W
72
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: KRINGLE_1 (-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
KRINGLE_1
PS00021
Kringle domain signature.
APOA_HUMAN
76-88
190-202
304-316
418-430
532-544
646-658
760-772
874-886
988-1000
1102-1114
1216-1228
1330-1342
1444-1456
1558-1570
1672-1684
1786-1798
1900-1912
2014-2026
2128-2140
2242-2254
2356-2368
2470-2482
2584-2596
2698-2710
2812-2824
2926-2938
3040-3052
3154-3166
3268-3280
3382-3394
3496-3508
3610-3622
3724-3736
3830-3842
3944-3956
4058-4070
4172-4184
4277-4290
2
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
A:50-63
B:50-63
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (33 KB)
Header - Asym.Unit
Biol.Unit 1 (15 KB)
Header - Biol.Unit 1
Biol.Unit 2 (15 KB)
Header - Biol.Unit 2
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