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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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4BV4
Asym. Unit
Info
Asym.Unit (210 KB)
Biol.Unit 1 (203 KB)
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(1)
Title
:
STRUCTURE AND ALLOSTERY IN TOLL-SPATZLE RECOGNITION
Authors
:
M. F. Lewis, C. J. Arnot, H. Beeston, A. Mccoy, A. E. Ashcroft, N. J. Gay, M
Date
:
24 Jun 13 (Deposition) - 04 Dec 13 (Release) - 15 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : L,M,R
Biol. Unit 1: L,M,R (1x)
Keywords
:
Cytokine Recognition, Embryonic Development, Immune System, Innate Immunity, Leucine-Rich Repeats, Cystine-Knot, Glycoprotein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Lewis, C. J. Arnot, H. Beeston, A. Mccoy, A. E. Ashcroft, N. J. Gay, M. Gangloff
Cytokine Spatzle Binds To The Drosophila Immunoreceptor Tol With A Neurotrophin-Like Specificity And Couples Receptor Activation.
Proc. Natl. Acad. Sci. Usa V. 110 20461 2013
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Hetero Components
(3, 12)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
1c: BETA-D-MANNOSE (BMAc)
2a: ALPHA-D-MANNOSE (MANa)
2b: ALPHA-D-MANNOSE (MANb)
2c: ALPHA-D-MANNOSE (MANc)
3a: N-ACETYL-D-GLUCOSAMINE (NAGa)
3b: N-ACETYL-D-GLUCOSAMINE (NAGb)
3c: N-ACETYL-D-GLUCOSAMINE (NAGc)
3d: N-ACETYL-D-GLUCOSAMINE (NAGd)
3e: N-ACETYL-D-GLUCOSAMINE (NAGe)
3f: N-ACETYL-D-GLUCOSAMINE (NAGf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
3
Ligand/Ion
BETA-D-MANNOSE
2
MAN
3
Ligand/Ion
ALPHA-D-MANNOSE
3
NAG
6
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN R:80 , ARG R:106
Binding site for Mono-Saccharide NAG R 501 bound to ASN R 80
2
AC2
SOFTWARE
MET R:139 , ASN R:140 , LEU R:162 , HIS R:164
Binding site for Mono-Saccharide NAG R 601 bound to ASN R 140
3
AC3
SOFTWARE
THR R:245 , SER R:246 , THR R:269 , ASN R:270 , HIS R:294
Binding site for Mono-Saccharide NAG R 901 bound to ASN R 270
4
AC4
SOFTWARE
GLN L:52 , ARG R:325 , ASN R:346 , SER R:370 , THR R:393 , ASP R:394 , GLN R:417 , HOH R:2062
Binding site for Poly-Saccharide residues NAG R1101 through MAN R1108 bound to ASN R 346
5
AC5
SOFTWARE
VAL R:366 , ASN R:367 , THR R:390 , ASN R:391
Binding site for Mono-Saccharide NAG R1201 bound to ASN R 391
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SAPs(SNPs)/Variants
(6, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_TOLL_DROME_001 (E98G, chain R, )
2: VAR_TOLL_DROME_002 (G218S, chain R, )
3: VAR_TOLL_DROME_003 (T245S, chain R, )
4: VAR_TOLL_DROME_004 (T390I, chain R, )
5: VAR_TOLL_DROME_005 (T414A, chain R, )
6: VAR_TOLL_DROME_007 (L436T, chain R, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_TOLL_DROME_001
*
E
98
G
TOLL_DROME
---
---
R
E
98
G
2
UniProt
VAR_TOLL_DROME_002
*
G
218
S
TOLL_DROME
---
---
R
G
218
S
3
UniProt
VAR_TOLL_DROME_003
*
T
245
S
TOLL_DROME
---
---
R
T
245
S
4
UniProt
VAR_TOLL_DROME_004
*
T
390
I
TOLL_DROME
---
---
R
T
390
I
5
UniProt
VAR_TOLL_DROME_005
*
G
414
A
TOLL_DROME
---
---
R
T
414
A
6
UniProt
VAR_TOLL_DROME_007
*
M
460
T
TOLL_DROME
---
---
R
L
436
T
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 8)
Info
All PROSITE Patterns/Profiles
1: LRR (R:175-195|R:198-219|R:222-243|R:27...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
LRR
PS51450
Leucine-rich repeat profile.
TOLL_DROME
175-195
198-219
222-243
270-291
367-388
391-412
415-436
439-460
474-495
498-521
669-690
693-713
715-738
8
R:175-195
R:198-219
R:222-243
R:270-291
R:367-388
R:391-410
-
R:416-434
-
R:440-440
-
-
-
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Label:
Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Label:
Sorry, no Info available
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Atom Selection
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)
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Nucleic
Backbone
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Ligand
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Chain R
Asymmetric Unit 1
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Asym.Unit (210 KB)
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Header - Biol.Unit 1
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