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4BNF
Biol. Unit 1
Info
Asym.Unit (720 KB)
Biol.Unit 1 (351 KB)
Biol.Unit 2 (355 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF S. AUREUS FABI IN COMPLEX WITH NADP AND 2-PHENOXY-5-PROPYLPHENOL
Authors
:
J. Schiebel, A. Chang, G. R. Bommineni, P. J. Tonge, C. Kisker
Date
:
15 May 13 (Deposition) - 05 Jun 13 (Release) - 03 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: E,F,G,H (1x)
Biol. Unit 2: A,B,C,D (1x)
Keywords
:
Short-Chain Dehydrogenase/Reductase Superfamily, Fatty Acid Biosynthesis, Lipid Synthesis, Safabi, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Chang, J. Schiebel, W. Yu, G. R. Bommineni, P. Pan, M. V. Baxter, A. Khanna, C. A. Sotriffer, C. F. Kisker, P. J. Tonge
Rational Optimization Of Drug-Target Residence Time: Insights From Inhibitor Binding To The S. Aureus Fabi Enzyme-Product Complex.
Biochemistry V. 52 4217 2013
[
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Hetero Components
(3, 11)
Info
All Hetero Components
1a: GLUTAMIC ACID (GLUa)
1b: GLUTAMIC ACID (GLUb)
1c: GLUTAMIC ACID (GLUc)
1d: GLUTAMIC ACID (GLUd)
1e: GLUTAMIC ACID (GLUe)
1f: GLUTAMIC ACID (GLUf)
2a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
2b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
2c: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPc)
2d: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPd)
2e: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPe)
2f: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPf)
2g: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPg)
2h: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPh)
3a: 2-PHENOXY-5-PROPYL-PHENOL (PV4a)
3b: 2-PHENOXY-5-PROPYL-PHENOL (PV4b)
3c: 2-PHENOXY-5-PROPYL-PHENOL (PV4c)
3d: 2-PHENOXY-5-PROPYL-PHENOL (PV4d)
3e: 2-PHENOXY-5-PROPYL-PHENOL (PV4e)
3f: 2-PHENOXY-5-PROPYL-PHENOL (PV4f)
3g: 2-PHENOXY-5-PROPYL-PHENOL (PV4g)
3h: 2-PHENOXY-5-PROPYL-PHENOL (PV4h)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GLU
3
Mod. Amino Acid
GLUTAMIC ACID
2
NAP
4
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
3
PV4
4
Ligand/Ion
2-PHENOXY-5-PROPYL-PHENOL
[
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Sites
(16, 16)
Info
All Sites
01: AC3 (SOFTWARE)
02: AC4 (SOFTWARE)
03: AC5 (SOFTWARE)
04: AC7 (SOFTWARE)
05: AC8 (SOFTWARE)
06: BC1 (SOFTWARE)
07: BC4 (SOFTWARE)
08: BC5 (SOFTWARE)
09: BC6 (SOFTWARE)
10: BC7 (SOFTWARE)
11: BC8 (SOFTWARE)
12: BC9 (SOFTWARE)
13: CC1 (SOFTWARE)
14: CC2 (SOFTWARE)
15: CC3 (SOFTWARE)
16: CC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC3
SOFTWARE
ARG A:103 , VAL A:201 , GLY A:203 , HOH A:2152 , LYS E:199
BINDING SITE FOR RESIDUE GLU A1259
02
AC4
SOFTWARE
ARG B:103 , GLY B:202 , GLY B:203 , HOH B:2175 , HOH B:2176 , LYS G:199
BINDING SITE FOR RESIDUE GLU B1000
03
AC5
SOFTWARE
GLY B:13 , ILE B:14 , ALA B:15 , SER B:19 , ILE B:20 , ARG B:40 , LYS B:41 , SER B:44 , ILE B:65 , ASP B:66 , VAL B:67 , SER B:93 , ILE B:94 , ALA B:95 , ILE B:120 , THR B:145 , THR B:146 , TYR B:147 , LYS B:164 , ALA B:190 , PRO B:192 , ILE B:193 , THR B:195 , SER B:197 , PV4 B:1258 , HOH B:2013 , HOH B:2014 , HOH B:2015 , HOH B:2017 , GLU G:100
BINDING SITE FOR RESIDUE NAP B1257
04
AC7
SOFTWARE
ARG C:103 , GLY C:203 , HOH C:2160 , ARG F:18 , LYS F:199
BINDING SITE FOR RESIDUE GLU C1000
05
AC8
SOFTWARE
GLY C:13 , ILE C:14 , ALA C:15 , SER C:19 , ILE C:20 , ARG C:40 , LYS C:41 , SER C:44 , ILE C:65 , ASP C:66 , VAL C:67 , SER C:93 , ILE C:94 , ALA C:95 , ILE C:120 , THR C:145 , THR C:146 , LYS C:164 , ALA C:190 , GLY C:191 , PRO C:192 , ILE C:193 , THR C:195 , LEU C:196 , SER C:197 , PV4 C:1258 , HOH C:2008 , HOH C:2009 , HOH C:2010 , HOH C:2013 , GLU F:100 , HOH F:2087
BINDING SITE FOR RESIDUE NAP C1257
06
BC1
SOFTWARE
LYS A:199 , HOH D:2103 , ARG E:103 , GLY E:203 , PHE E:204 , ASN E:205
BINDING SITE FOR RESIDUE GLU E1000
07
BC4
SOFTWARE
LYS C:199 , HOH E:2171 , ARG F:103 , LYS F:199 , VAL F:201 , GLY F:202 , GLY F:203 , PHE F:204
BINDING SITE FOR RESIDUE GLU F1000
08
BC5
SOFTWARE
HOH A:2096 , GLY E:13 , ILE E:14 , ALA E:15 , SER E:19 , ILE E:20 , ARG E:40 , LYS E:41 , SER E:44 , ILE E:65 , ASP E:66 , VAL E:67 , SER E:93 , ILE E:94 , ALA E:95 , ILE E:120 , THR E:145 , THR E:146 , TYR E:147 , LYS E:164 , ALA E:190 , GLY E:191 , PRO E:192 , ILE E:193 , THR E:195 , SER E:197 , PV4 E:1258 , HOH E:2008 , HOH E:2009 , HOH E:2010 , HOH E:2011
BINDING SITE FOR RESIDUE NAP E1257
09
BC6
SOFTWARE
LEU E:102 , TYR E:147 , TYR E:157 , SER E:197 , ALA E:198 , NAP E:1257
BINDING SITE FOR RESIDUE PV4 E1258
10
BC7
SOFTWARE
LYS B:199 , HOH F:2164 , HOH F:2165 , ARG G:103 , GLY G:202 , GLY G:203
BINDING SITE FOR RESIDUE GLU G1000
11
BC8
SOFTWARE
GLU C:100 , GLY F:13 , ILE F:14 , ALA F:15 , SER F:19 , ILE F:20 , ARG F:40 , LYS F:41 , SER F:44 , ILE F:65 , ASP F:66 , VAL F:67 , SER F:93 , ILE F:94 , ALA F:95 , ILE F:120 , THR F:145 , THR F:146 , TYR F:147 , LYS F:164 , ALA F:190 , PRO F:192 , ILE F:193 , THR F:195 , SER F:197 , PV4 F:1258 , HOH F:2018 , HOH F:2019 , HOH F:2020 , HOH F:2022 , HOH F:2166
BINDING SITE FOR RESIDUE NAP F1257
12
BC9
SOFTWARE
TYR F:147 , TYR F:157 , SER F:197 , ALA F:198 , NAP F:1257
BINDING SITE FOR RESIDUE PV4 F1258
13
CC1
SOFTWARE
GLU B:100 , GLY G:13 , ILE G:14 , ALA G:15 , SER G:19 , ILE G:20 , ARG G:40 , LYS G:41 , SER G:44 , ILE G:65 , ASP G:66 , VAL G:67 , SER G:93 , ILE G:94 , ALA G:95 , ILE G:120 , THR G:145 , THR G:146 , TYR G:147 , LYS G:164 , ALA G:190 , GLY G:191 , PRO G:192 , ILE G:193 , THR G:195 , SER G:197 , PV4 G:1258 , HOH G:2012 , HOH G:2013 , HOH G:2014 , HOH G:2016
BINDING SITE FOR RESIDUE NAP G1257
14
CC2
SOFTWARE
ALA G:95 , TYR G:147 , TYR G:157 , MET G:160 , SER G:197 , ALA G:198 , PHE G:204 , ILE G:207 , NAP G:1257
BINDING SITE FOR RESIDUE PV4 G1258
15
CC3
SOFTWARE
GLY H:13 , ILE H:14 , ALA H:15 , SER H:19 , ILE H:20 , ARG H:40 , LYS H:41 , SER H:44 , ILE H:65 , ASP H:66 , VAL H:67 , SER H:93 , ILE H:94 , ALA H:95 , ILE H:120 , THR H:145 , THR H:146 , TYR H:147 , LYS H:164 , ALA H:190 , GLY H:191 , PRO H:192 , ILE H:193 , THR H:195 , LEU H:196 , SER H:197 , PV4 H:1258 , HOH H:2009 , HOH H:2010 , HOH H:2011 , HOH H:2012
BINDING SITE FOR RESIDUE NAP H1257
16
CC4
SOFTWARE
ALA H:95 , TYR H:147 , TYR H:157 , MET H:160 , SER H:197 , ALA H:198 , VAL H:201 , NAP H:1257 , HOH H:2051
BINDING SITE FOR RESIDUE PV4 H1258
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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set fontsize 20
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