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4BLD
Asym. Unit
Info
Asym.Unit (1006 KB)
Biol.Unit 1 (256 KB)
Biol.Unit 2 (259 KB)
Biol.Unit 3 (254 KB)
Biol.Unit 4 (255 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A HUMAN SUPPRESSOR OF FUSED (SUFU)-GLI3P COMPLEX
Authors
:
A. L. Cherry, C. Finta, M. Karlstrom, D. De Sanctis, R. Toftgard, L. Jov
Date
:
02 May 13 (Deposition) - 27 Nov 13 (Release) - 15 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,E (1x)
Biol. Unit 2: C,G (1x)
Biol. Unit 3: B,F (1x)
Biol. Unit 4: D,H (1x)
Keywords
:
Sugar Binding Protein-Signaling Protein Complex, Signaling Protein, Chimera, Fusion Protein, Hedgehog Signaling, Gene Regulation, Transcription Factor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. L. Cherry, C. Finta, M. Karlstrom, Q. Jin, T. Schwend, J. Astorga-Wells, R. A. Zubarev, M. Del Campo, A. R. Criswell, D. De Sanctis, L. Jovine, R. Toftgard
Structural Basis Of Sufu-Gli Interaction In Hedgehog Signalling Regulation
Acta Crystallogr. , Sect. D V. 69 2579 2013
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(2, 8)
Info
All Hetero Components
1a: MALTOSE (MALa)
1b: MALTOSE (MALb)
1c: MALTOSE (MALc)
1d: MALTOSE (MALd)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MAL
4
Ligand/Ion
MALTOSE
2
ZN
4
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:13 , ASP A:15 , LYS A:16 , TRP A:63 , ALA A:64 , ASP A:66 , ARG A:67 , GLU A:112 , GLU A:154 , PRO A:155 , TYR A:156 , TRP A:341 , ARG A:345
BINDING SITE FOR RESIDUE MAL A 900
2
AC2
SOFTWARE
HIS A:751 , HIS A:753 , HIS B:216 , GLU B:222
BINDING SITE FOR RESIDUE ZN A 910
3
AC3
SOFTWARE
ASN B:13 , ASP B:15 , LYS B:16 , TRP B:63 , ALA B:64 , ASP B:66 , ARG B:67 , GLU B:112 , GLU B:154 , PRO B:155 , TYR B:156 , TRP B:341
BINDING SITE FOR RESIDUE MAL B 900
4
AC4
SOFTWARE
HIS B:751 , HIS B:753 , HIS C:216 , GLU C:222
BINDING SITE FOR RESIDUE ZN B 910
5
AC5
SOFTWARE
ASN C:13 , ASP C:15 , LYS C:16 , TRP C:63 , ALA C:64 , ASP C:66 , ARG C:67 , GLU C:112 , GLU C:154 , PRO C:155 , TYR C:156 , TRP C:341 , ARG C:345
BINDING SITE FOR RESIDUE MAL C 900
6
AC6
SOFTWARE
HIS C:751 , HIS C:753 , HIS D:216 , GLU D:222
BINDING SITE FOR RESIDUE ZN C 910
7
AC7
SOFTWARE
ASN D:13 , ASP D:15 , LYS D:16 , TRP D:63 , ALA D:64 , ASP D:66 , ARG D:67 , GLU D:112 , GLU D:154 , PRO D:155 , TYR D:156 , ARG D:345
BINDING SITE FOR RESIDUE MAL D 900
8
AC8
SOFTWARE
HIS A:216 , GLU A:222 , HIS D:751 , HIS D:753
BINDING SITE FOR RESIDUE ZN D 910
[
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]
SAPs(SNPs)/Variants
(1, 4)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_021566 (P332L, chain A/B/C/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021566
P
15
L
SUFU_HUMAN
Polymorphism
28942088
A/B/C/D
P
332
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: SBP_BACTERIAL_1 (A:108-125,B:108-125,C:108-125,D:10...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SBP_BACTERIAL_1
PS01037
Bacterial extracellular solute-binding proteins, family 1 signature.
MALE_ECOLI
133-150
4
A:108-125
B:108-125
C:108-125
D:108-125
[
close PROSITE info
]
Exons
(11, 44)
Info
All Exons
Exon 1.1a (A:318-401 | B:318-401 | C:318-401 ...)
Exon 1.2 (A:401-446 | B:401-446 | C:401-446 ...)
Exon 1.3 (A:446-492 | B:446-492 | C:446-492 ...)
Exon 1.5 (A:492-539 | B:492-539 | C:492-539 ...)
Exon 1.6 (A:540-568 | B:540-568 | C:540-568 ...)
Exon 1.7 (A:568-592 | B:568-592 | C:568-592 ...)
Exon 1.8 (A:593-617 | B:593-616 | C:593-618 ...)
Exon 1.10 (A:627-651 | B:633-651 | C:625-651 ...)
Exon 1.11a (A:651-697 | B:651-697 (gaps) | C:6...)
Exon 1.13 (A:698-714 | B:698-714 | C:698-711 ...)
Exon 1.14b (A:718-753 (gaps) | B:719-753 (gaps...)
View:
Select:
Label:
All Exon Boundaries
01: Boundary -/1.1a
02: Boundary 1.1a/1.2
03: Boundary 1.2/1.3
04: Boundary 1.3/1.5
05: Boundary 1.5/1.6
06: Boundary 1.6/1.7
07: Boundary 1.7/1.8
08: Boundary 1.8/1.9b
09: Boundary 1.9b/1.10
10: Boundary 1.10/1.11a
11: Boundary 1.11a/1.13
12: Boundary 1.13/1.14b
13: Boundary 1.14b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000369902
1a
ENSE00001865530
chr10:
104263744-104264091
348
SUFU_HUMAN
1-61
61
4
A:318-401
B:318-401
C:318-401
D:318-401
84
84
84
84
1.2
ENST00000369902
2
ENSE00002193061
chr10:
104268926-104269060
135
SUFU_HUMAN
61-106
46
4
A:401-446
B:401-446
C:401-446
D:401-446
46
46
46
46
1.3
ENST00000369902
3
ENSE00001101237
chr10:
104309727-104309863
137
SUFU_HUMAN
106-152
47
4
A:446-492
B:446-492
C:446-492
D:446-492
47
47
47
47
1.5
ENST00000369902
5
ENSE00001101234
chr10:
104352339-104352481
143
SUFU_HUMAN
152-199
48
4
A:492-539
B:492-539
C:492-539
D:492-539
48
48
48
48
1.6
ENST00000369902
6
ENSE00000933214
chr10:
104353393-104353478
86
SUFU_HUMAN
200-228
29
4
A:540-568
B:540-568
C:540-568
D:540-568
29
29
29
29
1.7
ENST00000369902
7
ENSE00000933215
chr10:
104353750-104353822
73
SUFU_HUMAN
228-252
25
4
A:568-592
B:568-592
C:568-592
D:568-592
25
25
25
25
1.8
ENST00000369902
8
ENSE00001135908
chr10:
104356897-104357050
154
SUFU_HUMAN
253-304
52
4
A:593-617
B:593-616
C:593-618
D:593-616
25
24
26
24
1.9b
ENST00000369902
9b
ENSE00000933217
chr10:
104359190-104359301
112
SUFU_HUMAN
304-341
38
0
-
-
1.10
ENST00000369902
10
ENSE00001135883
chr10:
104375025-104375159
135
SUFU_HUMAN
341-386
46
4
A:627-651
B:633-651
C:625-651
D:626-651
25
19
27
26
1.11a
ENST00000369902
11a
ENSE00001135876
chr10:
104377047-104377185
139
SUFU_HUMAN
386-432
47
4
A:651-697
B:651-697 (gaps)
C:651-697
D:651-697
47
47
47
47
1.13
ENST00000369902
13
ENSE00000811580
chr10:
104386932-104387000
69
SUFU_HUMAN
433-455
23
4
A:698-714
B:698-714
C:698-711
D:698-715
17
17
14
18
1.14b
ENST00000369902
14b
ENSE00001929982
chr10:
104389823-104393292
3470
SUFU_HUMAN
456-484
29
4
A:718-753 (gaps)
B:719-753 (gaps)
C:719-753 (gaps)
D:719-753 (gaps)
36
35
35
35
[
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]
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
[
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]
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Asym.Unit (1006 KB)
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