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4BJ6
Asym. Unit
Info
Asym.Unit (321 KB)
Biol.Unit 1 (158 KB)
Biol.Unit 2 (159 KB)
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(1)
Title
:
CRYSTAL STRUCTURE RIF2 IN COMPLEX WITH THE C-TERMINAL DOMAIN OF RAP1 (RAP1-RCT)
Authors
:
T. Shi, R. D. Bunker, H. Gut, A. Scrima, N. H. Thoma
Date
:
16 Apr 13 (Deposition) - 19 Jun 13 (Release) - 19 Jun 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.26
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: B,C,D (1x)
Biol. Unit 2: A,E,F (1x)
Keywords
:
Transcription, Genome Stability, Telomere Associated Proteins, Aaa+ Fold
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Shi, R. D. Bunker, S. Mattarocci, C. Ribeyre, M. Faty, H. Gut, A. Scrima, U. Rass, S. M. Rubin, D. Shore, N. H. Thoma
Rif1 And Rif2 Shape Telomere Funcation And Architecture Through Multivalent Rap1 Interactions
Cell(Cambridge, Mass. ) V. 153 1340 2013
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Hetero Components
(1, 10)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
1e: SULFATE ION (SO4e)
1f: SULFATE ION (SO4f)
1g: SULFATE ION (SO4g)
1h: SULFATE ION (SO4h)
1i: SULFATE ION (SO4i)
1j: SULFATE ION (SO4j)
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No.
Name
Count
Type
Full Name
1
SO4
10
Ligand/Ion
SULFATE ION
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG E:747 , LYS E:748 , ASN E:749
BINDING SITE FOR RESIDUE SO4 E1826
02
AC2
SOFTWARE
HIS B:118 , ILE B:119 , HIS B:120 , HIS B:336 , PRO B:337 , PHE B:338 , THR B:339
BINDING SITE FOR RESIDUE SO4 B1389
03
AC3
SOFTWARE
HIS A:118 , ILE A:119 , HIS A:120 , HIS A:336 , PRO A:337 , PHE A:338 , THR A:339
BINDING SITE FOR RESIDUE SO4 A1389
04
AC4
SOFTWARE
ARG A:363 , SER B:105 , MET B:106 , SO4 B:1392
BINDING SITE FOR RESIDUE SO4 B1390
05
AC5
SOFTWARE
ARG C:747 , LYS C:748 , ASN C:749
BINDING SITE FOR RESIDUE SO4 C1826
06
AC6
SOFTWARE
GLY E:726 , ASP E:727 , TYR E:728 , LYS E:735
BINDING SITE FOR RESIDUE SO4 E1827
07
AC7
SOFTWARE
THR B:283 , CYS B:284
BINDING SITE FOR RESIDUE SO4 B1391
08
AC8
SOFTWARE
ARG B:104 , SER B:105 , MET B:106 , SO4 B:1390
BINDING SITE FOR RESIDUE SO4 B1392
09
AC9
SOFTWARE
LYS A:296 , THR A:314 , SO4 A:1391
BINDING SITE FOR RESIDUE SO4 A1390
10
BC1
SOFTWARE
LYS A:296 , SER A:311 , THR A:314 , SO4 A:1390
BINDING SITE FOR RESIDUE SO4 A1391
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(1, 2)
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All Exons
Exon 1.1 (C:675-825 | E:675-825)
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YNL216W
1
YNL216W.1
XIV:241690-244173
2484
RAP1_YEAST
1-827
827
2
C:675-825
E:675-825
151
151
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (321 KB)
Header - Asym.Unit
Biol.Unit 1 (158 KB)
Header - Biol.Unit 1
Biol.Unit 2 (159 KB)
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