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4BCX
Asym. Unit
Info
Asym.Unit (50 KB)
Biol.Unit 1 (46 KB)
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(1)
Title
:
GAMMA 2 ADAPTIN EAR DOMAIN CRYSTAL STRUCTURE
Authors
:
M. C. Juergens, J. Voros, G. Rautureau, D. Shepherd, V. E. Pye, J. Muldoo C. M. Johnson, A. Ashcroft, S. M. V. Freund, N. Ferguson
Date
:
03 Oct 12 (Deposition) - 10 Jul 13 (Release) - 12 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Protein Transport, Gae, Gamma Adaptin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. C. Jurgens, J. Voros, G. J. P. Rautureau, D. A. Shepherd, V. E. Pye, J. Muldoon, C. M. Johnson, A. E. Ashcroft, S. M. V. Freund, N. Ferguson
The Hepatitis B Virus Pres1 Domain Hijacks Host Trafficking Proteins By Motif Mimicry.
Nat. Chem. Biol. V. 9 540 2013
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: IMIDAZOLE (IMDa)
2a: 1,3-PROPANDIOL (PDOa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
IMD
1
Ligand/Ion
IMIDAZOLE
2
PDO
1
Ligand/Ion
1,3-PROPANDIOL
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:716 , LYS A:758 , GLU A:775
BINDING SITE FOR RESIDUE IMD A 1786
2
AC2
SOFTWARE
HOH A:2110
BINDING SITE FOR RESIDUE PDO A 1787
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
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Exons
(3, 3)
Info
All Exons
Exon 1.17 (A:666-719)
Exon 1.18 (A:720-752)
Exon 1.19b (A:753-785)
View:
Select:
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All Exon Boundaries
1: Boundary 1.16/1.17
2: Boundary 1.17/1.18
3: Boundary 1.18/1.19b
4: Boundary 1.19b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000397120
1b
ENSE00001527366
chr14:
24036987-24036948
40
AP1G2_HUMAN
-
0
0
-
-
1.1e
ENST00000397120
1e
ENSE00002163144
chr14:
24036528-24036320
209
AP1G2_HUMAN
1-68
68
0
-
-
1.2
ENST00000397120
2
ENSE00001380724
chr14:
24035895-24035771
125
AP1G2_HUMAN
69-110
42
0
-
-
1.3
ENST00000397120
3
ENSE00000889289
chr14:
24035628-24035487
142
AP1G2_HUMAN
110-157
48
0
-
-
1.4a
ENST00000397120
4a
ENSE00001387199
chr14:
24035369-24035273
97
AP1G2_HUMAN
158-190
33
0
-
-
1.4c
ENST00000397120
4c
ENSE00000889287
chr14:
24035101-24035025
77
AP1G2_HUMAN
190-215
26
0
-
-
1.5
ENST00000397120
5
ENSE00001382639
chr14:
24034910-24034815
96
AP1G2_HUMAN
216-247
32
0
-
-
1.6
ENST00000397120
6
ENSE00000889285
chr14:
24034408-24034328
81
AP1G2_HUMAN
248-274
27
0
-
-
1.7
ENST00000397120
7
ENSE00001379613
chr14:
24033869-24033771
99
AP1G2_HUMAN
275-307
33
0
-
-
1.8
ENST00000397120
8
ENSE00000889283
chr14:
24033597-24033542
56
AP1G2_HUMAN
308-326
19
0
-
-
1.9c
ENST00000397120
9c
ENSE00001384905
chr14:
24033368-24033255
114
AP1G2_HUMAN
326-364
39
0
-
-
1.9d
ENST00000397120
9d
ENSE00001268068
chr14:
24033065-24032925
141
AP1G2_HUMAN
364-411
48
0
-
-
1.10
ENST00000397120
10
ENSE00001389733
chr14:
24032847-24032793
55
AP1G2_HUMAN
411-429
19
0
-
-
1.11
ENST00000397120
11
ENSE00001389075
chr14:
24032711-24032589
123
AP1G2_HUMAN
430-470
41
0
-
-
1.12
ENST00000397120
12
ENSE00000889278
chr14:
24031802-24031713
90
AP1G2_HUMAN
471-500
30
0
-
-
1.13b
ENST00000397120
13b
ENSE00001379347
chr14:
24031624-24031497
128
AP1G2_HUMAN
501-543
43
0
-
-
1.14
ENST00000397120
14
ENSE00000889276
chr14:
24031275-24031171
105
AP1G2_HUMAN
543-578
36
0
-
-
1.15
ENST00000397120
15
ENSE00001268569
chr14:
24030844-24030721
124
AP1G2_HUMAN
578-619
42
0
-
-
1.16
ENST00000397120
16
ENSE00001370277
chr14:
24030640-24030505
136
AP1G2_HUMAN
620-665
46
0
-
-
1.17
ENST00000397120
17
ENSE00001385856
chr14:
24029627-24029464
164
AP1G2_HUMAN
665-719
55
1
A:666-719
54
1.18
ENST00000397120
18
ENSE00000654059
chr14:
24029245-24029147
99
AP1G2_HUMAN
720-752
33
1
A:720-752
33
1.19b
ENST00000397120
19b
ENSE00001404703
chr14:
24029059-24028777
283
AP1G2_HUMAN
753-785
33
1
A:753-785
33
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d4bcxa_ (A:)
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Clathrin adaptor appendage domain
(28)
Family
:
automated matches
(2)
Protein domain
:
automated matches
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d4bcxa_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (50 KB)
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