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4BC1
Biol. Unit 4
Info
Asym.Unit (746 KB)
Biol.Unit 1 (189 KB)
Biol.Unit 2 (189 KB)
Biol.Unit 3 (187 KB)
Biol.Unit 4 (191 KB)
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(1)
Title
:
STRUCTURE OF MOUSE ACETYLCHOLINESTERASE INHIBITED BY CBDP ( 30-MIN SOAK): CRESYL-SALIGENIN-PHOSPHOSERINE ADDUCT
Authors
:
E. Carletti, J. -P. Colletier, L. M. Schopfer, G. Santoni, P. Masson, O. Lockridge, F. Nachon, M. Weik
Date
:
30 Sep 12 (Deposition) - 06 Feb 13 (Release) - 27 Feb 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.95
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Hydrolase, Butyrylcholinesterase, Nerve Transmission, Inhibitor, Alpha-Beta Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Carletti, J. -P. Colletier, L. M. Schopfer, G. Santoni, P. Masson, O. Lockridge, F. Nachon, M. Weik
Inhibition Pathways Of The Potent Organophosphate Cbdp With Cholinesterases Revealed By X-Ray Crystallographic Snapshots And Mass Spectrometry
Chem. Res. Toxicol. V. 26 280 2013
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Hetero Components
(3, 7)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
1k: CHLORIDE ION (CLk)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
2e: N-ACETYL-D-GLUCOSAMINE (NAGe)
2f: N-ACETYL-D-GLUCOSAMINE (NAGf)
2g: N-ACETYL-D-GLUCOSAMINE (NAGg)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
3j: SULFATE ION (SO4j)
3k: SULFATE ION (SO4k)
3l: SULFATE ION (SO4l)
3m: SULFATE ION (SO4m)
3n: SULFATE ION (SO4n)
3o: SULFATE ION (SO4o)
4a: O-CRESYL-SALIGENIN PHOSPHATE (TQVa)
4b: O-CRESYL-SALIGENIN PHOSPHATE (TQVb)
4c: O-CRESYL-SALIGENIN PHOSPHATE (TQVc)
4d: O-CRESYL-SALIGENIN PHOSPHATE (TQVd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
NAG
3
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
3
SO4
3
Ligand/Ion
SULFATE ION
4
TQV
1
Ligand/Ion
O-CRESYL-SALIGENIN PHOSPHATE
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Sites
(10, 10)
Info
All Sites
01: CC3 (SOFTWARE)
02: CC6 (SOFTWARE)
03: CC7 (SOFTWARE)
04: CC8 (SOFTWARE)
05: CC9 (SOFTWARE)
06: DC1 (SOFTWARE)
07: DC2 (SOFTWARE)
08: DC7 (SOFTWARE)
09: DC8 (SOFTWARE)
10: DC9 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
CC3
SOFTWARE
LEU C:380 , HIS C:381 , HOH C:2257 , HOH C:2258 , HIS D:381 , PHE D:531
BINDING SITE FOR RESIDUE SO4 C1548
02
CC6
SOFTWARE
TRP D:86 , GLY D:121 , GLY D:122 , TYR D:124 , SER D:203 , ALA D:204 , PHE D:295 , ARG D:296 , PHE D:297 , TYR D:337 , HIS D:447 , HOH D:2074
BINDING SITE FOR RESIDUE TQV D 600
03
CC7
SOFTWARE
ARG D:525 , ALA D:526 , GLN D:527 , THR D:528
BINDING SITE FOR RESIDUE SO4 D1545
04
CC8
SOFTWARE
ARG C:13 , PRO C:55 , VAL D:59 , LEU D:60 , ASP D:61
BINDING SITE FOR RESIDUE SO4 D1546
05
CC9
SOFTWARE
HIS D:432 , ASN D:514 , LEU D:515
BINDING SITE FOR RESIDUE SO4 D1547
06
DC1
SOFTWARE
HOH D:2077
BINDING SITE FOR RESIDUE CL D1990
07
DC2
SOFTWARE
ARG A:253 , HIS D:287
BINDING SITE FOR RESIDUE CL D1991
08
DC7
SOFTWARE
ASN D:265 , GLU D:268
BINDING SITE FOR MONO-SACCHARIDE NAG D 701 BOUND TO ASN D 265
09
DC8
SOFTWARE
SER D:347 , ASN D:350
BINDING SITE FOR MONO-SACCHARIDE NAG D 702 BOUND TO ASN D 350
10
DC9
SOFTWARE
SER D:462 , ASN D:464
BINDING SITE FOR MONO-SACCHARIDE NAG D 703 BOUND TO ASN D 464
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: CARBOXYLESTERASE_B_2 (D:94-104)
2: CARBOXYLESTERASE_B_1 (D:190-205)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CARBOXYLESTERASE_B_2
PS00941
Carboxylesterases type-B signature 2.
ACES_MOUSE
125-135
1
-
-
-
D:94-104
2
CARBOXYLESTERASE_B_1
PS00122
Carboxylesterases type-B serine active site.
ACES_MOUSE
221-236
1
-
-
-
D:190-205
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4bc1a_ (A:)
1b: SCOP_d4bc1b_ (B:)
1c: SCOP_d4bc1c_ (C:)
1d: SCOP_d4bc1d_ (D:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
alpha/beta-Hydrolases
(971)
Superfamily
:
alpha/beta-Hydrolases
(971)
Family
:
Acetylcholinesterase-like
(219)
Protein domain
:
Acetylcholinesterase
(107)
Mouse (Mus musculus) [TaxId: 10090]
(17)
1a
d4bc1a_
A:
1b
d4bc1b_
B:
1c
d4bc1c_
C:
1d
d4bc1d_
D:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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Chain D
Asymmetric Unit 1
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select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
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show SS bonds with a radius of 100 units (=0.4Å)
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Show PDB file:
Asym.Unit (746 KB)
Header - Asym.Unit
Biol.Unit 1 (189 KB)
Header - Biol.Unit 1
Biol.Unit 2 (189 KB)
Header - Biol.Unit 2
Biol.Unit 3 (187 KB)
Header - Biol.Unit 3
Biol.Unit 4 (191 KB)
Header - Biol.Unit 4
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