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4B31
Asym. Unit
Info
Asym.Unit (480 KB)
Biol.Unit 1 (472 KB)
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(1)
Title
:
PROBING THE ACTIVE CENTER OF CATALASE-PHENOL OXIDASE FROM SCYTALIDIUM THERMOPHILUM
Authors
:
Y. Yuzugullu, C. H. Trinh, A. R. Pearson, Z. B. Ogel, M. J. Mcpherson
Date
:
20 Jul 12 (Deposition) - 10 Apr 13 (Release) - 17 Apr 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.25
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Oxidoreductase, Heme Catalase, Molecular Channels
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
Y. Yuzugullu, C. H. Trinh, L. Fairhurst, Z. B. Ogel, M. J. Mcpherson, A. R. Pearson
Investigating The Active Centre Of The Scytalidium Thermophilum Catalase
Acta Crystallogr. , Sect. F V. 69 369 2013
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Hetero Components
(2, 9)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
2a: CIS-HEME D HYDROXYCHLORIN GAMMA-SP... (HDDa)
2b: CIS-HEME D HYDROXYCHLORIN GAMMA-SP... (HDDb)
2c: CIS-HEME D HYDROXYCHLORIN GAMMA-SP... (HDDc)
2d: CIS-HEME D HYDROXYCHLORIN GAMMA-SP... (HDDd)
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Label:
No.
Name
Count
Type
Full Name
1
CA
5
Ligand/Ion
CALCIUM ION
2
HDD
4
Ligand/Ion
CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:79 , VAL A:81 , HIS A:82 , ARG A:119 , GLY A:138 , VAL A:153 , GLY A:154 , PHE A:160 , PHE A:168 , VAL A:228 , HIS A:229 , PHE A:345 , LEU A:361 , ARG A:365 , SER A:368 , TYR A:369 , THR A:372 , GLN A:373 , ARG A:376 , HOH A:2094 , HOH A:2098 , HOH A:2127 , HOH A:2290
BINDING SITE FOR RESIDUE HDD A 900
2
AC2
SOFTWARE
ARG A:178 , HIS A:190 , SER A:192 , HOH A:2194 , HOH A:2473
BINDING SITE FOR RESIDUE CA A1698
3
AC3
SOFTWARE
HOH A:2314 , HOH A:2315 , HOH A:3001 , HOH A:3002 , HOH B:2270 , HOH D:2171
BINDING SITE FOR RESIDUE CA A1699
4
AC4
SOFTWARE
ARG B:79 , HIS B:82 , ARG B:119 , GLY B:138 , VAL B:153 , GLY B:154 , ALA B:155 , PHE B:160 , PHE B:168 , VAL B:228 , HIS B:229 , PHE B:345 , LEU B:361 , ARG B:365 , SER B:368 , TYR B:369 , THR B:372 , GLN B:373 , ARG B:376 , HOH B:2072 , HOH B:2074 , HOH B:2103 , HOH B:2245
BINDING SITE FOR RESIDUE HDD B 900
5
AC5
SOFTWARE
HOH A:2359 , ARG B:178 , HIS B:190 , ASP B:191 , SER B:192 , HOH B:2384
BINDING SITE FOR RESIDUE CA B1699
6
AC6
SOFTWARE
ARG C:79 , VAL C:81 , HIS C:82 , ARG C:119 , GLY C:138 , VAL C:153 , GLY C:154 , PHE C:160 , PHE C:168 , VAL C:228 , HIS C:229 , PHE C:345 , LEU C:361 , ARG C:365 , SER C:368 , TYR C:369 , THR C:372 , GLN C:373 , ARG C:376 , HOH C:2020 , HOH C:2024 , HOH C:2040 , HOH C:2163
BINDING SITE FOR RESIDUE HDD C 900
7
AC7
SOFTWARE
ARG C:178 , HIS C:190 , ASP C:191 , SER C:192 , HOH C:2089 , HOH C:2091
BINDING SITE FOR RESIDUE CA C1698
8
AC8
SOFTWARE
ARG D:79 , VAL D:81 , HIS D:82 , ARG D:119 , GLY D:138 , VAL D:153 , GLY D:154 , PHE D:168 , HIS D:229 , PHE D:345 , LEU D:361 , ARG D:365 , SER D:368 , TYR D:369 , THR D:372 , GLN D:373 , ARG D:376 , HOH D:2023 , HOH D:2046 , HOH D:2156
BINDING SITE FOR RESIDUE HDD D 900
9
AC9
SOFTWARE
HOH C:2188 , ARG D:178 , HIS D:190 , ASP D:191 , SER D:192 , HOH D:2247
BINDING SITE FOR RESIDUE CA D1699
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (480 KB)
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