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4B0J
Asym. Unit
Info
Asym.Unit (1.1 MB)
Biol.Unit 1 (115 KB)
Biol.Unit 10 (115 KB)
Biol.Unit 2 (116 KB)
Biol.Unit 3 (116 KB)
Biol.Unit 4 (114 KB)
Biol.Unit 5 (115 KB)
Biol.Unit 6 (115 KB)
Biol.Unit 7 (116 KB)
Biol.Unit 8 (116 KB)
Biol.Unit 9 (116 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF 3-HYDROXYDECANOYL-ACYL CARRIER PROTEIN DEHYDRATASE (FABA) FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH 5-(2-THIENYL)-3-ISOXAZOLYL METHANOL
Authors
:
L. Moynie, S. A. Mcmahon, F. G. Duthie, J. H. Naismith
Date
:
02 Jul 12 (Deposition) - 28 Nov 12 (Release) - 04 Sep 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T
Biol. Unit 1: S,T (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B (1x)
Biol. Unit 4: G,H (1x)
Biol. Unit 5: E,F (1x)
Biol. Unit 6: M,N (1x)
Biol. Unit 7: O,P (1x)
Biol. Unit 8: K,L (1x)
Biol. Unit 9: I,J (1x)
Biol. Unit 10: Q,R (1x)
Keywords
:
Lyase, Fatty Acid Biosynthesis, Bacterial Virulence, Drug Discovery
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Moynie, S. M. Leckie, S. A. Mcmahon, F. G. Duthie, A. Koehnke, J. W. Taylor, M. S. Alphey, R. Brenk, A. D. Smith, J. H. Naismith
Structural Insights Into The Mechanism And Inhibition Of The Beta-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase From Pseudomonas Aeruginosa
J. Mol. Biol. V. 425 365 2013
[
close entry info
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Hetero Components
(1, 20)
Info
All Hetero Components
1a: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQa)
1b: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQb)
1c: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQc)
1d: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQd)
1e: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQe)
1f: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQf)
1g: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQg)
1h: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQh)
1i: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQi)
1j: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQj)
1k: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQk)
1l: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQl)
1m: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQm)
1n: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQn)
1o: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQo)
1p: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQp)
1q: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQq)
1r: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQr)
1s: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQs)
1t: (5-THIOPHEN-2-YLISOXAZOL-3-YL)METH... (3MQt)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
3MQ
20
Ligand/Ion
(5-THIOPHEN-2-YLISOXAZOL-3-YL)METHANOL
[
close Hetero Component info
]
Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:79 , PHE A:113 , PHE A:114 , GLY A:115 , GLN A:116 , HOH A:2036 , ALA B:105 , PHE B:171
BINDING SITE FOR RESIDUE 3MQ A1172
02
AC2
SOFTWARE
ALA A:105 , LEU A:106 , PHE A:171 , VAL B:76 , GLY B:79 , PHE B:113 , GLY B:115 , GLN B:116
BINDING SITE FOR RESIDUE 3MQ B1172
03
AC3
SOFTWARE
VAL C:76 , MET C:77 , GLY C:79 , PHE C:113 , PHE C:114 , GLY C:115 , GLN C:116 , HOH C:2032 , HOH C:2060 , ALA D:105 , LEU D:106
BINDING SITE FOR RESIDUE 3MQ C1172
04
AC4
SOFTWARE
ALA C:105 , VAL D:76 , GLY D:79 , PHE D:113 , GLY D:115 , GLN D:116 , HOH D:2019
BINDING SITE FOR RESIDUE 3MQ D1172
05
AC5
SOFTWARE
VAL E:76 , MET E:77 , GLY E:79 , PHE E:113 , GLY E:115 , GLN E:116 , HOH E:2025 , HOH E:2041 , ALA F:105 , LEU F:106 , PHE F:171
BINDING SITE FOR RESIDUE 3MQ E1172
06
AC6
SOFTWARE
ALA E:105 , LEU E:106 , VAL F:76 , GLY F:79 , PHE F:113 , PHE F:114 , GLY F:115 , GLN F:116 , HOH F:2022
BINDING SITE FOR RESIDUE 3MQ F1172
07
AC7
SOFTWARE
MET K:77 , PRO K:78 , GLY K:79 , PHE K:113 , GLY K:115 , GLN K:116 , HOH K:2042 , HOH K:2043 , ALA L:105 , LEU L:106 , PHE L:171
BINDING SITE FOR RESIDUE 3MQ K1172
08
AC8
SOFTWARE
HIS G:70 , GLY G:79 , PHE G:113 , PHE G:114 , GLY G:115 , GLN G:116 , HOH G:2021 , ARG H:104 , ALA H:105 , LEU H:106
BINDING SITE FOR RESIDUE 3MQ G1172
09
AC9
SOFTWARE
ALA G:105 , LEU G:106 , PHE G:171 , HOH G:2027 , MET H:77 , PRO H:78 , GLY H:79 , PHE H:113 , GLY H:115 , GLN H:116 , HOH H:2024
BINDING SITE FOR RESIDUE 3MQ H1172
10
BC1
SOFTWARE
VAL I:76 , GLY I:79 , PHE I:113 , GLY I:115 , GLN I:116 , ALA J:105 , LEU J:106 , PHE J:171
BINDING SITE FOR RESIDUE 3MQ I1172
11
BC2
SOFTWARE
ARG I:104 , ALA I:105 , PHE I:171 , VAL J:76 , GLY J:79 , PHE J:113 , PHE J:114 , GLY J:115 , GLN J:116 , HOH J:2034
BINDING SITE FOR RESIDUE 3MQ J1172
12
BC3
SOFTWARE
VAL O:76 , MET O:77 , GLY O:79 , PHE O:113 , GLY O:115 , GLN O:116 , HOH O:2043 , HOH O:2044 , ALA P:105 , LEU P:106
BINDING SITE FOR RESIDUE 3MQ O1172
13
BC4
SOFTWARE
ARG K:104 , ALA K:105 , LEU K:106 , HOH K:2029 , VAL L:76 , GLY L:79 , PHE L:113 , PHE L:114 , GLY L:115 , GLN L:116 , HOH L:2031
BINDING SITE FOR RESIDUE 3MQ L1172
14
BC5
SOFTWARE
HOH L:2043 , HIS Q:70 , VAL Q:76 , GLY Q:79 , PHE Q:113 , PHE Q:114 , GLY Q:115 , GLN Q:116 , ARG R:104 , ALA R:105
BINDING SITE FOR RESIDUE 3MQ Q1172
15
BC6
SOFTWARE
VAL M:76 , GLY M:79 , PHE M:113 , PHE M:114 , GLY M:115 , GLN M:116 , ALA N:105 , LEU N:106
BINDING SITE FOR RESIDUE 3MQ M1172
16
BC7
SOFTWARE
ARG Q:104 , ALA Q:105 , MET R:77 , GLY R:79 , PHE R:113 , PHE R:114 , GLY R:115 , GLN R:116
BINDING SITE FOR RESIDUE 3MQ R1172
17
BC8
SOFTWARE
ALA M:105 , PHE M:171 , VAL N:76 , GLY N:79 , PHE N:113 , GLY N:115 , GLN N:116 , HOH N:2022
BINDING SITE FOR RESIDUE 3MQ N1172
18
BC9
SOFTWARE
GLY S:79 , PHE S:113 , GLY S:115 , GLN S:116 , ARG T:104 , ALA T:105 , LEU T:106
BINDING SITE FOR RESIDUE 3MQ S1172
19
CC1
SOFTWARE
ALA O:105 , VAL P:76 , GLY P:79 , PHE P:113 , PHE P:114 , GLY P:115 , GLN P:116
BINDING SITE FOR RESIDUE 3MQ P1172
20
CC2
SOFTWARE
ARG S:104 , ALA S:105 , LEU S:106 , PHE S:171 , GLY T:79 , PHE T:113 , GLY T:115 , GLN T:116 , HOH T:2014
BINDING SITE FOR RESIDUE 3MQ T1172
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 20)
Info
All SCOP Domains
1a: SCOP_d4b0ja_ (A:)
1b: SCOP_d4b0jb_ (B:)
1c: SCOP_d4b0jc_ (C:)
1d: SCOP_d4b0jd_ (D:)
1e: SCOP_d4b0je_ (E:)
1f: SCOP_d4b0jf_ (F:)
1g: SCOP_d4b0jg_ (G:)
1h: SCOP_d4b0jh_ (H:)
1i: SCOP_d4b0ji_ (I:)
1j: SCOP_d4b0jj_ (J:)
1k: SCOP_d4b0jk_ (K:)
1l: SCOP_d4b0jl_ (L:)
1m: SCOP_d4b0jm_ (M:)
1n: SCOP_d4b0jn_ (N:)
1o: SCOP_d4b0jo_ (O:)
1p: SCOP_d4b0jp_ (P:)
1q: SCOP_d4b0jq_ (Q:)
1r: SCOP_d4b0jr_ (R:)
1s: SCOP_d4b0js_ (S:)
1t: SCOP_d4b0jt_ (T:)
View:
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)
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(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Thioesterase/thiol ester dehydrase-isomerase
(151)
Superfamily
:
Thioesterase/thiol ester dehydrase-isomerase
(151)
Family
:
beta-Hydroxydecanol thiol ester dehydrase
(11)
Protein domain
:
automated matches
(7)
Pseudomonas aeruginosa [TaxId: 208964]
(6)
1a
d4b0ja_
A:
1b
d4b0jb_
B:
1c
d4b0jc_
C:
1d
d4b0jd_
D:
1e
d4b0je_
E:
1f
d4b0jf_
F:
1g
d4b0jg_
G:
1h
d4b0jh_
H:
1i
d4b0ji_
I:
1j
d4b0jj_
J:
1k
d4b0jk_
K:
1l
d4b0jl_
L:
1m
d4b0jm_
M:
1n
d4b0jn_
N:
1o
d4b0jo_
O:
1p
d4b0jp_
P:
1q
d4b0jq_
Q:
1r
d4b0jr_
R:
1s
d4b0js_
S:
1t
d4b0jt_
T:
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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Sorry, no Info available
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Chain F
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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show SS bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (1.1 MB)
Header - Asym.Unit
Biol.Unit 1 (115 KB)
Header - Biol.Unit 1
Biol.Unit 10 (115 KB)
Header - Biol.Unit 10
Biol.Unit 2 (116 KB)
Header - Biol.Unit 2
Biol.Unit 3 (116 KB)
Header - Biol.Unit 3
Biol.Unit 4 (114 KB)
Header - Biol.Unit 4
Biol.Unit 5 (115 KB)
Header - Biol.Unit 5
Biol.Unit 6 (115 KB)
Header - Biol.Unit 6
Biol.Unit 7 (116 KB)
Header - Biol.Unit 7
Biol.Unit 8 (116 KB)
Header - Biol.Unit 8
Biol.Unit 9 (116 KB)
Header - Biol.Unit 9
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