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4AYT
Asym. Unit
Info
Asym.Unit (100 KB)
Biol.Unit 1 (183 KB)
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(1)
Title
:
STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10
Authors
:
A. C. W. Pike, C. A. Shintre, Q. Li, J. Kim, F. Von Delft, A. J. Barr, S. Das A. Chaikuad, X. Xia, A. Quigley, Y. Dong, L. Dong, T. Krojer, M. Vollmar J. R. C. Muniz, J. E. Bray, G. Berridge, R. Chalk, O. Gileadi, N. Burgess L. Shrestha, S. Goubin, J. Yang, P. Mahajan, S. Mukhopadhyay, A. N. Bul C. H. Arrowsmith, J. Weigelt, C. Bountra, A. M. Edwards, E. P. Carpente
Date
:
22 Jun 12 (Deposition) - 11 Jul 12 (Release) - 25 Mar 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.85
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Membrane Protein, Mitochondrial Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. A. Shintre, A. C. W. Pike, Q. Li, J. Kim, A. J. Barr, S. Goubin, L. Shrestha, J. Yang, G. Berridge, J. Ross, P. J. Stansfeld, M. S. P. Sansom, A. M. Edwards, C. Bountra, B. D. Marsden, F. Von Delft, A. N. Bullock, O. Gileadi, N. A. Burgess-Brown, E. P. Carpenter
Structures Of Abcb10, A Human Atp-Binding Cassette Transporter In Apo- And Nucleotide-Bound States
Proc. Natl. Acad. Sci. Usa V. 110 9710 2013
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Hetero Components
(5, 8)
Info
All Hetero Components
1a: PHOSPHOMETHYLPHOSPHONIC ACID ADENY... (ACPa)
2a: CARDIOLIPIN (CDLa)
2b: CARDIOLIPIN (CDLb)
3a: GLYCINE (GLYa)
4a: DODECYL-BETA-D-MALTOSIDE (LMTa)
4b: DODECYL-BETA-D-MALTOSIDE (LMTb)
4c: DODECYL-BETA-D-MALTOSIDE (LMTc)
5a: MAGNESIUM ION (MGa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACP
1
Ligand/Ion
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
2
CDL
2
Ligand/Ion
CARDIOLIPIN
3
GLY
1
Mod. Amino Acid
GLYCINE
4
LMT
3
Ligand/Ion
DODECYL-BETA-D-MALTOSIDE
5
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:534 , GLN A:575 , ASP A:658 , ACP A:900
BINDING SITE FOR RESIDUE MG A 801
2
AC2
SOFTWARE
ASP A:264 , TYR A:501 , ALA A:503 , ILE A:509 , SER A:529 , GLY A:530 , SER A:531 , GLY A:532 , LYS A:533 , SER A:534 , THR A:535 , TYR A:544 , GLN A:575 , MG A:801 , HOH A:2055
BINDING SITE FOR RESIDUE ACP A 900
3
AC3
SOFTWARE
ARG A:170 , TYR A:234 , ARG A:242
BINDING SITE FOR RESIDUE GLY A1717
4
AC4
SOFTWARE
ASP A:197 , TYR A:200 , THR A:201 , PRO A:203 , LEU A:214 , GLY A:418 , MET A:421 , THR A:427 , VAL A:428 , ASN A:484 , LYS A:486 , HOH A:2033
BINDING SITE FOR RESIDUE LMT A1720
5
AC5
SOFTWARE
PRO A:312 , ASN A:313 , THR A:316 , PHE A:317 , SER A:405 , LYS A:416 , LMT A:1724
BINDING SITE FOR RESIDUE CDL A1721
6
AC6
SOFTWARE
SER A:449
BINDING SITE FOR RESIDUE LMT A1723
7
AC7
SOFTWARE
SER A:405 , SER A:412 , TYR A:415 , LYS A:416 , LEU A:420 , SER A:423 , HIS A:425 , CDL A:1721 , HOH A:2032
BINDING SITE FOR RESIDUE LMT A1724
8
AC8
SOFTWARE
PHE A:191 , LEU A:214 , PHE A:222 , ASN A:407
BINDING SITE FOR RESIDUE CDL A1727
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_048133 (R242G, chain A, )
2: VAR_035735 (R471T, chain A, )
3: VAR_031435 (D545N, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_048133
R
242
G
ABCBA_HUMAN
Polymorphism
17584642
A
R
242
G
2
UniProt
VAR_035735
R
471
T
ABCBA_HUMAN
Unclassified
---
A
R
471
T
3
UniProt
VAR_031435
D
545
N
ABCBA_HUMAN
Polymorphism
35698797
A
D
545
N
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: ABC_TM1F (A:172-457)
2: ABC_TRANSPORTER_1 (A:634-648)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ABC_TM1F
PS50929
ABC transporter integral membrane type-1 fused domain profile.
ABCBA_HUMAN
172-457
1
A:172-457
2
ABC_TRANSPORTER_1
PS00211
ABC transporters family signature.
ABCBA_HUMAN
634-648
1
A:634-648
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Chain A
Asymmetric Unit 1
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