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4AVE
Asym. Unit
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Asym.Unit (25 KB)
Biol.Unit 1 (21 KB)
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(1)
Title
:
C.LACTEUS NERVE HB IN THE DEOXY FORM
Authors
:
F. Germani, A. Pesce, A. Venturini, L. Moens, M. Bolognesi, S. Dewilde, M. Nardini
Date
:
25 May 12 (Deposition) - 17 Apr 13 (Release) - 05 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Oxygen Transport, Nerve Globin, Heme Reactivity, Deoxy State, Protein Matrix Tunnel
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Germani, A. Pesce, A. Venturini, L. Moens, M. Bolognesi, S. Dewilde M. Nardini
High Resolution Crystal Structures Of The Cerebratulus Lacteus Mini-Hb In The Unligated And Carbomonoxy States.
Int. J. Mol. Sci. V. 13 8025 2012
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Hetero Components
(4, 5)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: GLYCEROL (GOLa)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
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No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
GOL
1
Ligand/Ion
GLYCEROL
3
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
MET A:0 , PHE A:10 , TYR A:21 , LYS A:24 , PHE A:25 , GLN A:44 , LYS A:47 , ARG A:68 , HIS A:69 , ARG A:72 , PHE A:79 , ILE A:102 , SO4 A:1113 , HOH A:2030 , HOH A:2035 , HOH A:2059 , HOH A:2111 , HOH A:2115 , HOH A:2116
BINDING SITE FOR RESIDUE HEM A 144
2
AC2
SOFTWARE
VAL A:1 , ASN A:2 , TRP A:3 , ALA A:4 , VAL A:49 , ASN A:53 , ASP A:61 , GLY A:64 , ARG A:68 , HOH A:2117 , HOH A:2118
BINDING SITE FOR RESIDUE GOL A1111
3
AC3
SOFTWARE
HIS A:18 , GLU A:20 , TYR A:21 , ALA A:39 , HOH A:2050 , HOH A:2119
BINDING SITE FOR RESIDUE SO4 A1112
4
AC4
SOFTWARE
MET A:0 , VAL A:1 , ARG A:68 , HEM A:144 , HOH A:2041 , HOH A:2081 , HOH A:2120
BINDING SITE FOR RESIDUE SO4 A1113
5
AC5
SOFTWARE
ASN A:2 , HOH A:2001 , HOH A:2103
BINDING SITE FOR RESIDUE ACT A1114
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
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1a: SCOP_d4avea_ (A:)
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Organisms
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Class
:
All alpha proteins
(14657)
Fold
:
Globin-like
(1351)
Superfamily
:
Globin-like
(1308)
Family
:
Nerve tissue mini-hemoglobin (neural globin)
(17)
Protein domain
:
Nerve tissue mini-hemoglobin (neural globin)
(13)
Milky ribbon worm (Cerebratulus lacteus) [TaxId: 6221]
(13)
1a
d4avea_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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