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4AQT
Asym. Unit
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Asym.Unit (64 KB)
Biol.Unit 1 (112 KB)
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(1)
Title
:
LAMININ GAMMA1 LN-LE1-2 STRUCTURE
Authors
:
F. Carafoli, S. Hussain, E. Hohenester
Date
:
19 Apr 12 (Deposition) - 15 Aug 12 (Release) - 15 Aug 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Cell Adhesion
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Carafoli, S. Hussain, E. Hohenester
Crystal Structures Of The Network-Forming Short-Arm Tips Of The Laminin Beta1 And Gamma1 Chains.
Plos One V. 7 42473 2012
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
2a: CALCIUM ION (CAa)
3a: N-ACETYL-D-GLUCOSAMINE (NAGa)
3b: N-ACETYL-D-GLUCOSAMINE (NAGb)
3c: N-ACETYL-D-GLUCOSAMINE (NAGc)
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No.
Name
Count
Type
Full Name
1
BMA
1
Ligand/Ion
BETA-D-MANNOSE
2
CA
1
Ligand/Ion
CALCIUM ION
3
NAG
3
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PHE A:103 , ASP A:106 , THR A:114 , SER A:276
BINDING SITE FOR RESIDUE CA A1001
2
AC2
SOFTWARE
PHE A:57 , ASN A:58 , THR A:105
BINDING SITE FOR MONO-SACCHARIDE NAG A2001 BOUND TO ASN A 58
3
AC3
SOFTWARE
ASN A:132 , ARG A:248 , THR A:250
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 132 RESIDUES 3001 TO 3003
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(4, 5)
Info
All PROSITE Patterns/Profiles
1: LAMININ_NTER (A:44-283)
2: EGF_LAM_2 (A:284-329|A:340-395|-|-|-|-|-|-|-|...)
3: EGF_1 (A:303-314|-|-|-|-|-|-|-)
4: EGF_LAM_1 (A:365-395|-|-|-|-|-|-|-|-|-)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
LAMININ_NTER
PS51117
Laminin N-terminal domain profile.
LAMC1_MOUSE
44-283
1
A:44-283
2
EGF_LAM_2
PS50027
Laminin-type EGF-like (LE) domain profile.
LAMC1_MOUSE
284-329
340-395
396-442
443-492
722-770
771-825
826-881
882-932
933-980
981-1028
2
A:284-329
A:340-395
-
-
-
-
-
-
-
-
3
EGF_1
PS00022
EGF-like domain signature 1.
LAMC1_MOUSE
303-314
414-425
461-472
688-699
738-749
903-914
952-963
999-1010
1
A:303-314
-
-
-
-
-
-
-
4
EGF_LAM_1
PS01248
Laminin-type EGF-like (LE) domain signature.
LAMC1_MOUSE
365-398
414-445
461-495
688-722
738-773
790-826
847-882
903-935
952-983
999-1032
1
A:365-395
-
-
-
-
-
-
-
-
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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