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4AQ3
Biol. Unit 4
Info
Asym.Unit (299 KB)
Biol.Unit 1 (50 KB)
Biol.Unit 2 (50 KB)
Biol.Unit 3 (50 KB)
Biol.Unit 4 (52 KB)
Biol.Unit 5 (51 KB)
Biol.Unit 6 (51 KB)
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(1)
Title
:
HUMAN BCL-2 WITH PHENYLACYLSULFONAMIDE INHIBITOR
Authors
:
J. A. Bertrand, M. Fasolini, M. Modugno
Date
:
12 Apr 12 (Deposition) - 06 Jun 12 (Release) - 21 Nov 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Keywords
:
Apoptosis, Chimera
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. L. Perez, P. Banfi, J. A. Bertrand, Z. W. Cai, J. W. Grebinski, K. Kim, J. Lippy, M. Modugno, J. Naglich, R. J. Schmidt, A. Tebben, P. Vianello D. D. Wei, L. Zhang, A. Galvani, L. J. Lombardo, R. M. Borzilleri
Identification Of A Phenylacylsulfonamide Series Of Dual Bcl-2/Bcl-Xl Antagonists.
Bioorg. Med. Chem. Lett. V. 22 3946 2012
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: N,N-DIBUTYL-4-CHLORANYL-1-[2-(3,4-... (398a)
1b: N,N-DIBUTYL-4-CHLORANYL-1-[2-(3,4-... (398b)
1c: N,N-DIBUTYL-4-CHLORANYL-1-[2-(3,4-... (398c)
1d: N,N-DIBUTYL-4-CHLORANYL-1-[2-(3,4-... (398d)
1e: N,N-DIBUTYL-4-CHLORANYL-1-[2-(3,4-... (398e)
1f: N,N-DIBUTYL-4-CHLORANYL-1-[2-(3,4-... (398f)
View:
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Label:
No.
Name
Count
Type
Full Name
1
398
1
Ligand/Ion
N,N-DIBUTYL-4-CHLORANYL-1-[2-(3,4-DIHYDRO-1H-ISOQUINOLIN-2-YLCARBONYL)-4-[(7-IODANYLNAPHTHALEN-2-YL)SULFONYLCARBAMOYL]PHENYL]-5-METPYRAZOLE-3-CARBOXAMIDE
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Sites
(3, 3)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC3 (SOFTWARE)
3: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
PHE B:63 , TYR B:67 , ASP B:70 , PHE B:71 , MET B:74 , VAL B:92 , GLU B:95 , GLY B:104 , ALA B:108 , PHE B:112 , TYR B:161 , GLN D:58 , TYR D:161 , GLY D:162 , PRO E:82
BINDING SITE FOR RESIDUE 398 B1163
2
AC3
SOFTWARE
PHE C:63 , TYR C:67 , ASP C:70 , MET C:74 , GLU C:95 , LEU C:96 , TYR C:161 , PRO D:82 , GLN F:58 , TYR F:161 , GLY F:162
BINDING SITE FOR RESIDUE 398 C1163
3
AC4
SOFTWARE
PRO A:82 , GLN B:58 , LEU B:160 , TYR B:161 , GLY B:162 , PHE D:63 , TYR D:67 , ASP D:70 , MET D:74 , GLU D:95 , ALA D:108
BINDING SITE FOR RESIDUE 398 D1163
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_000829 (V52I, chain D, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_000829
V
93
I
BCL2_HUMAN
Unclassified
---
D
V
52
I
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(6, 12)
Info
All PROSITE Patterns/Profiles
1: BH4_1 (D:10-30)
2: BH4_2 (D:11-30)
3: BH3 (D:52-66)
4: BCL2_FAMILY (D:56-156)
5: BH1 (D:96-114)
6: BH2 (D:147-158)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BH4_1
PS01260
Apoptosis regulator, Bcl-2 family BH4 motif signature.
B2CL1_HUMAN
4-24
1
-
-
-
D:11-30
-
-
BCL2_HUMAN
10-30
1
-
-
-
D:10-30
-
-
2
BH4_2
PS50063
Apoptosis regulator, Bcl-2 family BH4 motif profile.
B2CL1_HUMAN
5-24
1
-
-
-
D:11-30
-
-
BCL2_HUMAN
11-30
1
-
-
-
D:11-30
-
-
3
BH3
PS01259
Apoptosis regulator, Bcl-2 family BH3 motif signature.
B2CL1_HUMAN
86-100
1
-
-
-
D:52-66
-
-
BCL2_HUMAN
93-107
1
-
-
-
D:52-66
-
-
4
BCL2_FAMILY
PS50062
BCL2-like apoptosis inhibitors family profile.
B2CL1_HUMAN
90-190
1
-
-
-
D:56-155
-
-
BCL2_HUMAN
97-197
1
-
-
-
D:56-156
-
-
5
BH1
PS01080
Apoptosis regulator, Bcl-2 family BH1 motif signature.
B2CL1_HUMAN
130-148
1
-
-
-
D:96-114
-
-
BCL2_HUMAN
137-155
1
-
-
-
D:96-114
-
-
6
BH2
PS01258
Apoptosis regulator, Bcl-2 family BH2 motif signature.
B2CL1_HUMAN
181-192
1
-
-
-
D:147-158
-
-
BCL2_HUMAN
188-199
1
-
-
-
D:147-158
-
-
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d4aq3a_ (A:)
1b: SCOP_d4aq3b_ (B:)
1c: SCOP_d4aq3c_ (C:)
1d: SCOP_d4aq3d_ (D:)
1e: SCOP_d4aq3e_ (E:)
1f: SCOP_d4aq3f_ (F:)
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Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Toxins' membrane translocation domains
(135)
Superfamily
:
Bcl-2 inhibitors of programmed cell death
(113)
Family
:
Bcl-2 inhibitors of programmed cell death
(102)
Protein domain
:
automated matches
(33)
Human (Homo sapiens) [TaxId: 9606]
(31)
1a
d4aq3a_
A:
1b
d4aq3b_
B:
1c
d4aq3c_
C:
1d
d4aq3d_
D:
1e
d4aq3e_
E:
1f
d4aq3f_
F:
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CATH Domains
(0, 0)
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Pfam Domains
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Chain D
Asymmetric Unit 1
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Asym.Unit (299 KB)
Header - Asym.Unit
Biol.Unit 1 (50 KB)
Header - Biol.Unit 1
Biol.Unit 2 (50 KB)
Header - Biol.Unit 2
Biol.Unit 3 (50 KB)
Header - Biol.Unit 3
Biol.Unit 4 (52 KB)
Header - Biol.Unit 4
Biol.Unit 5 (51 KB)
Header - Biol.Unit 5
Biol.Unit 6 (51 KB)
Header - Biol.Unit 6
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