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4AMV
Biol. Unit 2
Info
Asym.Unit (596 KB)
Biol.Unit 1 (408 KB)
Biol.Unit 2 (386 KB)
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(1)
Title
:
E.COLI GLUCOSAMINE-6P SYNTHASE IN COMPLEX WITH FRUCTOSE-6P
Authors
:
S. Mouilleron, B. Golinelli-Pimpaneau
Date
:
14 Mar 12 (Deposition) - 24 Apr 13 (Release) - 24 Apr 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (2x)
Biol. Unit 2: B,C (1x)
Keywords
:
Transferase, Ammonia Channeling, Glucosamine 6- Phosphate Synthase, N Terminal Nucleophile, Glutamine Amidotransferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
S. Mouilleron, M. A. Badet-Denisot, B. Golinelli-Pimpaneau
Glutamine Binding Opens The Ammonia Channel And Activates Glucosamine-6P Synthase
J. Biol. Chem. V. 281 4404 2006
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: FRUCTOSE -6-PHOSPHATE (F6Ra)
1b: FRUCTOSE -6-PHOSPHATE (F6Rb)
1c: FRUCTOSE -6-PHOSPHATE (F6Rc)
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No.
Name
Count
Type
Full Name
1
F6R
2
Ligand/Ion
FRUCTOSE -6-PHOSPHATE
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Sites
(2, 2)
Info
All Sites
1: AC2 (SOFTWARE)
2: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
HIS B:504 , CYS C:300 , GLY C:301 , THR C:302 , SER C:303 , SER C:347 , GLN C:348 , SER C:349 , THR C:352 , ALA C:400 , SER C:401 , LYS C:485 , GLU C:488 , HOH C:2171 , HOH C:2180 , HOH C:2183 , HOH C:2207
BINDING SITE FOR RESIDUE F6R C1609
2
AC3
SOFTWARE
CYS B:300 , GLY B:301 , THR B:302 , SER B:303 , SER B:347 , GLN B:348 , SER B:349 , THR B:352 , VAL B:399 , ALA B:400 , SER B:401 , LYS B:485 , GLU B:488 , HOH B:2014 , HOH B:2018 , HIS C:504
BINDING SITE FOR RESIDUE F6R B1609
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 6)
Info
All PROSITE Patterns/Profiles
1: GATASE_TYPE_2 (B:1-217,C:1-217)
2: SIS (B:285-425,B:457-598,C:457-598)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GATASE_TYPE_2
PS51278
Glutamine amidotransferase type 2 domain profile.
GLMS_ECOLI
2-218
2
-
B:1-217
C:1-217
2
SIS
PS51464
SIS domain profile.
GLMS_ECOLI
286-426
458-599
4
-
B:285-425
C:285-425
-
B:457-598
C:457-598
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 6)
Info
All SCOP Domains
1a: SCOP_d4amva2 (A:1-240)
1b: SCOP_d4amvb2 (B:1-240)
1c: SCOP_d4amvc2 (C:1-240)
2a: SCOP_d4amva1 (A:241-608)
2b: SCOP_d4amvb1 (B:241-608)
2c: SCOP_d4amvc1 (C:241-608)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ntn hydrolase-like
(356)
Superfamily
:
N-terminal nucleophile aminohydrolases (Ntn hydrolases)
(352)
Family
:
Class II glutamine amidotransferases
(27)
Protein domain
:
Glucosamine 6-phosphate synthase, N-terminal domain
(4)
Escherichia coli [TaxId: 562]
(4)
1a
d4amva2
A:1-240
1b
d4amvb2
B:1-240
1c
d4amvc2
C:1-240
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
SIS domain
(85)
Superfamily
:
SIS domain
(85)
Family
:
double-SIS domain
(16)
Protein domain
:
Isomerase domain of glucosamine 6-phosphate synthase (GLMS)
(5)
Escherichia coli [TaxId: 562]
(5)
2a
d4amva1
A:241-608
2b
d4amvb1
B:241-608
2c
d4amvc1
C:241-608
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CATH Domains
(0, 0 ; only for superseded entry 2BPL: 2,9)
Info
all CATH domains
1a: CATH_2bplA02 ()
1b: CATH_2bplB02 ()
1c: CATH_2bplC03 ()
1d: CATH_2bplC02 ()
1e: CATH_2bplA03 ()
1f: CATH_2bplB03 ()
2a: CATH_2bplA01 ()
2b: CATH_2bplB01 ()
2c: CATH_2bplC01 ()
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (596 KB)
Header - Asym.Unit
Biol.Unit 1 (408 KB)
Header - Biol.Unit 1
Biol.Unit 2 (386 KB)
Header - Biol.Unit 2
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