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4ALX
Asym. Unit
Info
Asym.Unit (358 KB)
Biol.Unit 1 (175 KB)
Biol.Unit 2 (178 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF LS-ACHBP COMPLEXED WITH THE POTENT NACHR ANTAGONIST DHBE
Authors
:
A. Shahsavar, J. S. Kastrup, E. O. Nielsen, J. L. Kristensen, M. Gajhede
Date
:
06 Mar 12 (Deposition) - 29 Aug 12 (Release) - 26 Sep 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: F,G,H,I,J (1x)
Biol. Unit 2: A,B,C,D,E (1x)
Keywords
:
Acetylcholine-Binding Protein, Lymnaea Stagnalis, Dihydro-B- Erythroidine, Antagonist, C-Loop
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Shahsavar, J. S. Kastrup, E. O. Nielsen, J. L. Kristensen, M. Gajhede, T. Balle
Crystal Structure Of Lymnaea Stagnalis Achbp Complexed With The Potent Nachr Antagonist Dh-Betab-E Suggests A Unique Mode Of Antagonism
Plos One V. 7 40757 2012
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Hetero Components
(3, 22)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
1b: PENTAETHYLENE GLYCOL (1PEb)
1c: PENTAETHYLENE GLYCOL (1PEc)
1d: PENTAETHYLENE GLYCOL (1PEd)
1e: PENTAETHYLENE GLYCOL (1PEe)
1f: PENTAETHYLENE GLYCOL (1PEf)
2a: (4BS,6S)-6-METHOXY-1,4,6,7,9,10,12... (IZNa)
2b: (4BS,6S)-6-METHOXY-1,4,6,7,9,10,12... (IZNb)
2c: (4BS,6S)-6-METHOXY-1,4,6,7,9,10,12... (IZNc)
2d: (4BS,6S)-6-METHOXY-1,4,6,7,9,10,12... (IZNd)
2e: (4BS,6S)-6-METHOXY-1,4,6,7,9,10,12... (IZNe)
2f: (4BS,6S)-6-METHOXY-1,4,6,7,9,10,12... (IZNf)
2g: (4BS,6S)-6-METHOXY-1,4,6,7,9,10,12... (IZNg)
2h: (4BS,6S)-6-METHOXY-1,4,6,7,9,10,12... (IZNh)
2i: (4BS,6S)-6-METHOXY-1,4,6,7,9,10,12... (IZNi)
2j: (4BS,6S)-6-METHOXY-1,4,6,7,9,10,12... (IZNj)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
3f: MAGNESIUM ION (MGf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
6
Ligand/Ion
PENTAETHYLENE GLYCOL
2
IZN
10
Ligand/Ion
(4BS,6S)-6-METHOXY-1,4,6,7,9,10,12,13-OCTAHYDRO-3H,5H-PYRANO[4',3':3,4]PYRIDO[2,1-I]INDOL-3-ONE
3
MG
6
Ligand/Ion
MAGNESIUM ION
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Sites
(22, 22)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:89 , TRP A:143 , CYS A:187 , TYR A:192 , GLN B:55 , LEU B:112 , MET B:114
BINDING SITE FOR RESIDUE IZN A 400
02
AC2
SOFTWARE
ASN A:9 , THR A:13 , LEU A:63 , ALA A:64 , TRP A:65 , ASN I:9 , LEU I:63
BINDING SITE FOR RESIDUE 1PE A1211
03
AC3
SOFTWARE
TYR B:89 , TRP B:143 , TYR B:185 , CYS B:187 , TYR B:192 , HOH B:2040 , TRP C:53 , LEU C:112 , MET C:114
BINDING SITE FOR RESIDUE IZN B 400
04
AC4
SOFTWARE
GLN B:54 , LEU B:86 , ALA B:87 , ALA B:88 , LYS B:94 , PRO B:95 , ILE B:117 , GLN B:119 , HOH B:2035 , HOH B:2056 , HOH B:2057 , LEU C:98 , PRO C:100
BINDING SITE FOR RESIDUE 1PE B1206
05
AC5
SOFTWARE
ASP B:2 , HOH B:2058 , ASP I:2
BINDING SITE FOR RESIDUE MG B1207
06
AC6
SOFTWARE
TYR C:89 , TRP C:143 , THR C:144 , TYR C:185 , CYS C:187 , TYR C:192 , GLN D:55 , LEU D:112 , MET D:114
BINDING SITE FOR RESIDUE IZN C 400
07
AC7
SOFTWARE
TYR D:89 , TRP D:143 , TYR D:185 , CYS D:187 , TYR D:192 , TRP E:53 , GLN E:55 , LEU E:112 , MET E:114
BINDING SITE FOR RESIDUE IZN D 400
08
AC8
SOFTWARE
TYR D:164 , HOH D:2086
BINDING SITE FOR RESIDUE MG D1205
09
AC9
SOFTWARE
HOH D:2088
BINDING SITE FOR RESIDUE MG D1206
10
BC1
SOFTWARE
GLN A:55 , LEU A:112 , TYR A:113 , MET A:114 , TYR E:89 , TRP E:143 , THR E:144 , CYS E:187 , TYR E:192
BINDING SITE FOR RESIDUE IZN E 400
11
BC2
SOFTWARE
TYR F:89 , TRP F:143 , TYR F:185 , CYS F:187 , TYR F:192 , TRP G:53 , ARG G:104 , LEU G:112 , MET G:114
BINDING SITE FOR RESIDUE IZN F 400
12
BC3
SOFTWARE
ASN D:9 , ASN F:9 , ILE F:10 , THR F:13 , THR F:62 , LEU F:63 , ALA F:64 , TRP F:65
BINDING SITE FOR RESIDUE 1PE F1206
13
BC4
SOFTWARE
ASP F:108 , HOH F:2053 , SER I:151
BINDING SITE FOR RESIDUE MG F1207
14
BC5
SOFTWARE
ASP E:2 , HOH E:2001 , ASP F:2 , ASP F:5
BINDING SITE FOR RESIDUE MG F1208
15
BC6
SOFTWARE
TYR G:89 , TRP G:143 , CYS G:187 , TYR G:192 , HOH G:2066 , TRP H:53 , GLN H:55 , LEU H:112 , MET H:114
BINDING SITE FOR RESIDUE IZN G 400
16
BC7
SOFTWARE
THR C:13 , THR C:62 , LEU C:63 , ALA C:64 , TRP C:65 , ASN G:9 , ILE G:10 , THR G:62 , LEU G:63 , ALA G:64 , TRP G:65
BINDING SITE FOR RESIDUE 1PE G1206
17
BC8
SOFTWARE
TYR H:89 , TRP H:143 , THR H:144 , TYR H:185 , CYS H:187 , TYR H:192 , TRP I:53 , GLN I:55 , LEU I:112 , MET I:114
BINDING SITE FOR RESIDUE IZN H 400
18
BC9
SOFTWARE
ASN B:9 , THR B:13 , THR B:62 , LEU B:63 , TRP B:65 , ASN H:9 , ILE H:10 , THR H:13 , THR H:62 , ALA H:64 , TRP H:65 , HOH H:2065
BINDING SITE FOR RESIDUE 1PE H1206
19
CC1
SOFTWARE
TYR I:89 , TRP I:143 , TYR I:185 , CYS I:187 , TYR I:192 , TRP J:53 , GLN J:55 , LEU J:112 , MET J:114
BINDING SITE FOR RESIDUE IZN I 400
20
CC2
SOFTWARE
GLN F:55 , LEU F:112 , MET F:114 , HOH F:2052 , TYR J:89 , TRP J:143 , THR J:144 , CYS J:187 , TYR J:192
BINDING SITE FOR RESIDUE IZN J 400
21
CC3
SOFTWARE
ASN E:9 , THR E:62 , ALA E:64 , LEU J:1 , ASN J:9 , ILE J:10 , THR J:13 , THR J:62 , LEU J:63 , ALA J:64 , TRP J:65
BINDING SITE FOR RESIDUE 1PE J1206
22
CC4
SOFTWARE
ASP A:2 , GLU F:157 , ASP J:2 , ASP J:5 , HOH J:2001
BINDING SITE FOR RESIDUE MG J1207
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Sorry, no Info available
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 10)
Info
All SCOP Domains
1a: SCOP_d4alxa_ (A:)
1b: SCOP_d4alxb_ (B:)
1c: SCOP_d4alxc_ (C:)
1d: SCOP_d4alxd_ (D:)
1e: SCOP_d4alxe_ (E:)
1f: SCOP_d4alxf_ (F:)
1g: SCOP_d4alxg_ (G:)
1h: SCOP_d4alxh_ (H:)
1i: SCOP_d4alxi_ (I:)
1j: SCOP_d4alxj_ (J:)
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Protein Domains
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
Nicotinic receptor ligand binding domain-like
(58)
Superfamily
:
Nicotinic receptor ligand binding domain-like
(58)
Family
:
Nicotinic receptor ligand binding domain-like
(18)
Protein domain
:
automated matches
(11)
Great pond snail (Lymnaea stagnalis) [TaxId: 6523]
(9)
1a
d4alxa_
A:
1b
d4alxb_
B:
1c
d4alxc_
C:
1d
d4alxd_
D:
1e
d4alxe_
E:
1f
d4alxf_
F:
1g
d4alxg_
G:
1h
d4alxh_
H:
1i
d4alxi_
I:
1j
d4alxj_
J:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
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Asymmetric Unit 1
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