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4AJM
Biol. Unit 2
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Asym.Unit (115 KB)
Biol.Unit 1 (56 KB)
Biol.Unit 2 (57 KB)
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(1)
Title
:
DEVELOPMENT OF A PLATE-BASED OPTICAL BIOSENSOR METHODOLOGY TO IDENTIFY PDE10 FRAGMENT INHIBITORS
Authors
:
S. Geschwindner, P. Johansson, L. Spadola, T. Akerud, E. Back, P. Hille R. Horsefeld, C. Scott, N. Spear, G. Tian, A. Tigerstrom, D. Aharony, J. S. Albert
Date
:
16 Feb 12 (Deposition) - 06 Mar 13 (Release) - 06 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,D
Biol. Unit 1: A (1x)
Biol. Unit 2: D (1x)
Keywords
:
Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Geschwindner, P. Johansson, L. Spadola, T. Akerud, E. Back, P. Hillertz, R. Horsefeld, C. Scott, N. Spear, G. Tian, A. Tigerstrom, D. Aharony, J. S. Albert
Development Of A Plate-Based Optical Biosensor Methodology To Identify Pde10 Fragment Inhibitors
To Be Published
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 3-AMINO-6-FLUORO-2-[4-(2-METHYLPYR... (3A6a)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
3A6
1
Ligand/Ion
3-AMINO-6-FLUORO-2-[4-(2-METHYLPYRIDIN-4-YL)PHENYL]-N-(METHYLSULFONYL)QUINOLINE-4-CARBOXAMIDE
2
MG
-1
Ligand/Ion
MAGNESIUM ION
3
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(3, 3)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC4 (SOFTWARE)
3: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
HIS D:529 , HIS D:563 , ASP D:564 , ASP D:674 , HOH D:2026
BINDING SITE FOR RESIDUE ZN D1402
2
AC4
SOFTWARE
ASP D:564 , THR D:633 , HOH D:2022 , HOH D:2025 , HOH D:2026 , HOH D:2027 , HOH D:2033
BINDING SITE FOR RESIDUE MG D1403
3
AC5
SOFTWARE
LYS A:686 , VAL D:678 , ILE D:692 , TYR D:693 , PHE D:696 , PRO D:712 , MET D:713 , LYS D:718 , GLU D:721 , VAL D:722 , GLY D:725 , GLN D:726 , PHE D:729
BINDING SITE FOR RESIDUE 3A6 D1769
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_047822 (R716K, chain D, )
2: VAR_047823 (D717N, chain D, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_047822
R
706
K
PDE10_HUMAN
Polymorphism
2224252
D
R
716
K
2
UniProt
VAR_047823
D
707
N
PDE10_HUMAN
Polymorphism
2860112
D
D
717
N
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PDEASE_I (D:563-574)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDEASE_I
PS00126
3'5'-cyclic nucleotide phosphodiesterases signature.
PDE10_HUMAN
553-564
1
-
D:563-574
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Exons
(0, 0)
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4ajma_ (A:)
1b: SCOP_d4ajmd_ (D:)
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Protein Domains
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Organisms
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)
Class
:
All alpha proteins
(14657)
Fold
:
HD-domain/PDEase-like
(204)
Superfamily
:
HD-domain/PDEase-like
(204)
Family
:
automated matches
(60)
Protein domain
:
automated matches
(60)
Human (Homo sapiens) [TaxId: 9606]
(44)
1a
d4ajma_
A:
1b
d4ajmd_
D:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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Sorry, no Info available
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Chain D
Asymmetric Unit 1
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Asym.Unit (115 KB)
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