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4AIC
Asym. Unit
Info
Asym.Unit (131 KB)
Biol.Unit 1 (125 KB)
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Title
:
X-RAY STRUCTURE OF 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, DXR, RV2870C, FROM MYCOBACTERIUM TUBERCULOSIS, IN COMPLEX WITH FOSMIDOMYCIN, MANGANESE AND NADPH
Authors
:
L. M. Henriksson, T. Unge, T. A. Jones, S. L. Mowbray
Date
:
09 Feb 12 (Deposition) - 22 Feb 12 (Release) - 22 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Oxidoreductase, Doxp/Mep Pathway
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
L. M. Henriksson, T. Unge, J. Carlsson, J. Aqvist, S. L. Mowbray, T. A. Jones
Structures Of Mycobacterium Tuberculosis 1-Deoxy-D-Xylulose- 5-Phosphate Reductoisomerase Provide New Insights Into Catalysis.
J. Biol. Chem. V. 282 19905 2007
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Hetero Components
(4, 7)
Info
All Hetero Components
1a: 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOS... (FOMa)
2a: MANGANESE (II) ION (MNa)
2b: MANGANESE (II) ION (MNb)
3a: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPa)
3b: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPb)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
View:
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No.
Name
Count
Type
Full Name
1
FOM
1
Ligand/Ion
3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID
2
MN
2
Ligand/Ion
MANGANESE (II) ION
3
NDP
2
Ligand/Ion
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
4
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:128 , ASP A:151 , SER A:152 , GLU A:153 , ALA A:176 , SER A:177 , HIS A:200 , TRP A:203 , SER A:213 , ASN A:218 , LYS A:219 , GLU A:222 , NDP A:1391 , MN A:1392 , HOH A:2133 , HOH A:2134 , HOH A:2156
BINDING SITE FOR RESIDUE FOM A1390
2
AC2
SOFTWARE
GLY A:19 , THR A:21 , GLY A:22 , SER A:23 , ILE A:24 , ALA A:46 , GLY A:47 , GLY A:48 , ALA A:49 , HIS A:50 , ALA A:69 , ALA A:103 , LEU A:104 , ALA A:126 , ASN A:127 , LYS A:128 , GLU A:129 , ASP A:151 , MET A:205 , GLY A:206 , ASN A:209 , MET A:267 , FOM A:1390 , HOH A:2002 , HOH A:2005 , HOH A:2008 , HOH A:2031 , HOH A:2064 , HOH A:2104 , HOH A:2237 , HOH A:2238 , HOH A:2239 , HOH A:2240
BINDING SITE FOR RESIDUE NDP A1391
3
AC3
SOFTWARE
LYS A:128 , ASP A:151 , GLU A:153 , GLU A:222 , FOM A:1390
BINDING SITE FOR RESIDUE MN A1392
4
AC4
SOFTWARE
ARG A:162 , TRP A:277 , PRO A:278 , HOH A:2120 , HOH A:2186
BINDING SITE FOR RESIDUE SO4 A1393
5
AC5
SOFTWARE
ASP B:151 , GLU B:153 , GLU B:222 , HOH B:2110 , HOH B:2111 , HOH B:2116
BINDING SITE FOR RESIDUE MN B1390
6
AC6
SOFTWARE
ALA B:176 , SER B:177 , SER B:213 , ASN B:218 , LYS B:219 , HOH B:2116 , HOH B:2132 , HOH B:2155 , HOH B:2160
BINDING SITE FOR RESIDUE SO4 B1391
7
AC7
SOFTWARE
GLY B:19 , THR B:21 , GLY B:22 , ALA B:46 , GLY B:47 , GLY B:48 , ALA B:49 , HIS B:50 , ALA B:69 , LEU B:104 , VAL B:105 , LEU B:108
BINDING SITE FOR RESIDUE NDP B1392
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
(0, 0 ; only for superseded entry 2JCZ: 2,4)
Info
all CATH domains
1a: CATH_2jczA01 ()
1b: CATH_2jczB01 ()
2a: CATH_2jczA03 ()
2b: CATH_2jczB03 ()
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (131 KB)
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