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Asym. Unit
Info
Asym.Unit (164 KB)
Biol.Unit 1 (155 KB)
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(1)
Title
:
IN MESO STRUCTURE OF ALGINATE TRANSPORTER, ALGE, FROM PSEUDOMONAS AERUGINOSA, PAO1
Authors
:
J. Tan, V. E. Pye, D. Aragao, M. Caffrey
Date
:
19 Jan 12 (Deposition) - 06 Feb 13 (Release) - 30 Sep 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Membrane Protein, Outer Membrane, Lipidic Cubic Phase, Beta Barrel,
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Tan, S. L. Rouse, D. Li, V. E. Pye, L. Vogeley, A. R. Brinth, T. El Arnaout, J. C. Whitney, P. L. Howell, M. S. P. Sansom, M. Caffrey
A Conformational Landscape For Alginate Secretion Across The Outer Membrane Of Pseudomonas Aeruginosa.
Acta Crystallogr. , Sect. D V. 70 2054 2014
[
close entry info
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Hetero Components
(7, 27)
Info
All Hetero Components
1a: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTA... (78Ma)
1b: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTA... (78Mb)
1c: (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTA... (78Mc)
2a: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTA... (78Na)
2b: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTA... (78Nb)
2c: (2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTA... (78Nc)
3a: CALCIUM ION (CAa)
4a: CITRATE ANION (FLCa)
5a: LAURYL DIMETHYLAMINE-N-OXIDE (LDAa)
5b: LAURYL DIMETHYLAMINE-N-OXIDE (LDAb)
5c: LAURYL DIMETHYLAMINE-N-OXIDE (LDAc)
5d: LAURYL DIMETHYLAMINE-N-OXIDE (LDAd)
5e: LAURYL DIMETHYLAMINE-N-OXIDE (LDAe)
5f: LAURYL DIMETHYLAMINE-N-OXIDE (LDAf)
5g: LAURYL DIMETHYLAMINE-N-OXIDE (LDAg)
5h: LAURYL DIMETHYLAMINE-N-OXIDE (LDAh)
5i: LAURYL DIMETHYLAMINE-N-OXIDE (LDAi)
5j: LAURYL DIMETHYLAMINE-N-OXIDE (LDAj)
5k: LAURYL DIMETHYLAMINE-N-OXIDE (LDAk)
5l: LAURYL DIMETHYLAMINE-N-OXIDE (LDAl)
5m: LAURYL DIMETHYLAMINE-N-OXIDE (LDAm)
5n: LAURYL DIMETHYLAMINE-N-OXIDE (LDAn)
5o: LAURYL DIMETHYLAMINE-N-OXIDE (LDAo)
6a: SODIUM ION (NAa)
6b: SODIUM ION (NAb)
7a: 3,6,9,12,15,18,21,24-OCTAOXAHEXACO... (PE5a)
7b: 3,6,9,12,15,18,21,24-OCTAOXAHEXACO... (PE5b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
78M
3
Ligand/Ion
(2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE
2
78N
3
Ligand/Ion
(2R)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE
3
CA
1
Ligand/Ion
CALCIUM ION
4
FLC
1
Ligand/Ion
CITRATE ANION
5
LDA
15
Ligand/Ion
LAURYL DIMETHYLAMINE-N-OXIDE
6
NA
2
Ligand/Ion
SODIUM ION
7
PE5
2
Ligand/Ion
3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL
[
close Hetero Component info
]
Sites
(26, 26)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TRP A:81 , TYR A:87 , PHE A:88 , PHE A:148 , HIS A:219 , MET A:270 , PRO A:271 , LEU A:272 , TYR A:274 , 78N A:1513 , HOH A:2003
BINDING SITE FOR RESIDUE 78M A1510
02
AC2
SOFTWARE
SER A:188 , GLY A:315 , VAL A:328 , TYR A:330 , LDA A:1496 , 78N A:1513
BINDING SITE FOR RESIDUE 78N A1511
03
AC3
SOFTWARE
TRP A:170 , VAL A:207 , PHE A:208 , HIS A:227 , THR A:253 , LEU A:432 , LEU A:464 , THR A:478 , 78M A:1515
BINDING SITE FOR RESIDUE 78M A1512
04
AC4
SOFTWARE
TRP A:81 , PHE A:148 , TRP A:215 , HIS A:219 , LDA A:1497 , 78M A:1510 , 78N A:1511 , HOH A:2131
BINDING SITE FOR RESIDUE 78N A1513
05
AC5
SOFTWARE
THR A:139 , ALA A:140 , TYR A:392 , ILE A:458
BINDING SITE FOR RESIDUE 78N A1514
06
AC6
SOFTWARE
ASN A:54 , ASP A:229 , LEU A:430 , GLY A:462 , GLY A:463 , LEU A:464 , THR A:478 , HIS A:480 , LDA A:1494 , 78M A:1512
BINDING SITE FOR RESIDUE 78M A1515
07
AC7
SOFTWARE
PRO A:75 , TRP A:318
BINDING SITE FOR RESIDUE LDA A1492
08
AC8
SOFTWARE
ASN A:67 , ASP A:68 , THR A:96 , LDA A:1494 , HOH A:2240
BINDING SITE FOR RESIDUE LDA A1493
09
AC9
SOFTWARE
ASN A:54 , GLY A:182 , THR A:205 , ASP A:229 , HIS A:480 , LDA A:1493 , 78M A:1515
BINDING SITE FOR RESIDUE LDA A1494
10
BC1
SOFTWARE
ALA A:94 , ALA A:95 , HOH A:2241
BINDING SITE FOR RESIDUE LDA A1495
11
BC2
SOFTWARE
GLN A:91 , ALA A:127 , ARG A:191 , LEU A:194 , ASP A:195 , GLN A:378 , TRP A:402 , 78N A:1511 , HOH A:2110
BINDING SITE FOR RESIDUE LDA A1496
12
BC3
SOFTWARE
TRP A:280 , PHE A:310 , LDA A:1500 , 78N A:1513 , HOH A:2242
BINDING SITE FOR RESIDUE LDA A1497
13
BC4
SOFTWARE
ASP A:210 , ILE A:211
BINDING SITE FOR RESIDUE LDA A1498
14
BC5
SOFTWARE
TRP A:386 , ALA A:394
BINDING SITE FOR RESIDUE LDA A1499
15
BC6
SOFTWARE
ALA A:278 , VAL A:312 , LDA A:1497
BINDING SITE FOR RESIDUE LDA A1500
16
BC7
SOFTWARE
VAL A:484 , PHE A:486
BINDING SITE FOR RESIDUE LDA A1501
17
BC8
SOFTWARE
LDA A:1505
BINDING SITE FOR RESIDUE LDA A1502
18
BC9
SOFTWARE
TRP A:215
BINDING SITE FOR RESIDUE LDA A1503
19
CC1
SOFTWARE
TYR A:398 , LYS A:400 , LDA A:1502
BINDING SITE FOR RESIDUE LDA A1505
20
CC2
SOFTWARE
PHE A:148 , ALA A:167 , GLN A:185
BINDING SITE FOR RESIDUE LDA A1506
21
CC3
SOFTWARE
LYS A:47 , ARG A:74 , THR A:101 , ASP A:102 , THR A:103 , ARG A:152 , HOH A:2041
BINDING SITE FOR RESIDUE FLC A1491
22
CC4
SOFTWARE
ALA A:136 , THR A:139 , TYR A:141 , GLU A:144 , HOH A:2064
BINDING SITE FOR RESIDUE NA A1507
23
CC5
SOFTWARE
ASN A:265 , ASN A:273 , ARG A:317 , ASN A:319 , LYS A:325
BINDING SITE FOR RESIDUE NA A1508
24
CC6
SOFTWARE
ASP A:55 , ASP A:57 , ALA A:61 , PRO A:62 , GLY A:63
BINDING SITE FOR RESIDUE CA A1509
25
CC7
SOFTWARE
ARG A:285 , ASN A:287 , GLN A:303 , GLY A:305 , ASP A:339 , GLY A:340 , GLN A:343 , HOH A:2163 , HOH A:2190
BINDING SITE FOR RESIDUE PE5 A1516
26
CC8
SOFTWARE
GLN A:159 , TRP A:160 , TRP A:254 , SER A:277 , THR A:279 , GLY A:311 , GLN A:346 , THR A:347
BINDING SITE FOR RESIDUE PE5 A1517
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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