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4AFF
Asym. Unit
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Asym.Unit (52 KB)
Biol.Unit 1 (133 KB)
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(1)
Title
:
HIGH RESOLUTION STRUCTURE OF A PII MUTANT (I86N) PROTEIN IN COMPLEX WITH ATP, MG AND FLC
Authors
:
K. Zeth, O. Fokina, V. R. Chellamuthu, K. Forchhammer
Date
:
19 Jan 12 (Deposition) - 01 Feb 12 (Release) - 15 Aug 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.05
Chains
:
Asym. Unit : A
Biol. Unit 1: A (3x)
Keywords
:
Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Zeth, O. Fokina, K. Forchhammer
An Engineered Pii Protein Variant That Senses A Novel Ligand: Atomic Resolution Structure Of The Complex With Citrate.
Acta Crystallogr. , Sect. D V. 68 901 2012
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
2a: CITRATE ANION (FLCa)
3a: MAGNESIUM ION (MGa)
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No.
Name
Count
Type
Full Name
1
ATP
1
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
2
FLC
1
Ligand/Ion
CITRATE ANION
3
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:7 , GLY A:27 , MET A:28 , THR A:29 , GLY A:35 , PHE A:36 , GLY A:37 , ARG A:38 , GLU A:62 , VAL A:64 , ASN A:86 , GLY A:87 , ASP A:88 , GLY A:89 , LYS A:90 , ARG A:101 , ARG A:103 , MG A:1118 , FLC A:1119 , HOH A:2061 , HOH A:2104 , HOH A:2114 , HOH A:2130
BINDING SITE FOR RESIDUE ATP A1117
2
AC2
SOFTWARE
ATP A:1117 , FLC A:1119
BINDING SITE FOR RESIDUE MG A1118
3
AC3
SOFTWARE
PHE A:36 , GLY A:37 , ARG A:38 , GLN A:39 , LYS A:40 , LEU A:56 , ASN A:86 , GLY A:87 , ASN A:108 , ATP A:1117 , MG A:1118 , HOH A:2061 , HOH A:2062 , HOH A:2065 , HOH A:2073 , HOH A:2102 , HOH A:2121
BINDING SITE FOR RESIDUE FLC A1119
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: PII_GLNB_DOM (A:1-112,A:1-112)
2: PII_GLNB_UMP (A:47-51,A:47-51)
3: PII_GLNB_CTER (A:83-96,A:83-96)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PII_GLNB_DOM
PS51343
P-II protein family profile.
GLNB_SYNE7
1-112
1
A:1-112
GLNB_SYNP6
1-112
1
A:1-112
2
PII_GLNB_UMP
PS00496
P-II protein uridylation site.
GLNB_SYNE7
46-51
1
A:47-51
GLNB_SYNP6
46-51
1
A:47-51
3
PII_GLNB_CTER
PS00638
P-II protein C-terminal region signature.
GLNB_SYNE7
83-96
1
A:83-96
GLNB_SYNP6
83-96
1
A:83-96
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Exons
(0, 0)
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SCOP Domains
(1, 1)
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1a: SCOP_d4affa_ (A:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
GlnB-like
(79)
Family
:
Prokaryotic signal transducing protein
(31)
Protein domain
:
automated matches
(9)
Synechococcus elongatus [TaxId: 32046]
(1)
1a
d4affa_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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