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Biol. Unit 2
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Biol.Unit 1, α-C (1.9 MB)
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Biol.Unit 2 (992 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PLASMODIAL PLP SYNTHASE COMPLEX
Authors
:
G. Guedez, I. Sinning, I. Tews
Date
:
03 Jan 12 (Deposition) - 25 Jan 12 (Release) - 25 Jan 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.61
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L (2x)
Biol. Unit 2: A,B,C,D,E,F,G,H,I,J,K,L (1x)
Keywords
:
Transferase-Transferase Complex, Pyridoxal 5-Phosphate Biosynthesis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Guedez, K. Hipp, V. Windeisen, B. Derrer, M. Gengenbacher, B. Boettcher, I. Sinning, B. Kappes, I. Tews
Assembly Of The Eukaryotic Plp-Synthase Complex From Plasmodium And Activation Of The Pdx1 Enzyme.
Structure V. 20 172 2012
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Hetero Components
(1, 12)
Info
All Hetero Components
1a: PHOSPHATE ION (PO4a)
1b: PHOSPHATE ION (PO4b)
1c: PHOSPHATE ION (PO4c)
1d: PHOSPHATE ION (PO4d)
1e: PHOSPHATE ION (PO4e)
1f: PHOSPHATE ION (PO4f)
1g: PHOSPHATE ION (PO4g)
1h: PHOSPHATE ION (PO4h)
1i: PHOSPHATE ION (PO4i)
1j: PHOSPHATE ION (PO4j)
1k: PHOSPHATE ION (PO4k)
1l: PHOSPHATE ION (PO4l)
View:
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Label:
No.
Name
Count
Type
Full Name
1
PO4
12
Ligand/Ion
PHOSPHATE ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:118 , ARG A:140 , ARG A:141 , LYS E:190
BINDING SITE FOR RESIDUE PO4 A 301
02
AC2
SOFTWARE
GLY A:156 , GLY A:216 , GLY A:217 , GLY A:238 , SER A:239
BINDING SITE FOR RESIDUE PO4 A 302
03
AC3
SOFTWARE
HIS B:118 , ARG B:140 , ARG B:141 , LYS D:190
BINDING SITE FOR RESIDUE PO4 B 301
04
AC4
SOFTWARE
GLY B:156 , GLY B:217 , VAL B:237 , GLY B:238 , SER B:239
BINDING SITE FOR RESIDUE PO4 B 302
05
AC5
SOFTWARE
HIS C:118 , ARG C:140 , ARG C:141 , LYS C:190
BINDING SITE FOR RESIDUE PO4 C 301
06
AC6
SOFTWARE
GLY C:156 , GLY C:216 , GLY C:217 , GLY C:238 , SER C:239
BINDING SITE FOR RESIDUE PO4 C 302
07
AC7
SOFTWARE
LYS B:190 , HIS D:118 , ARG D:140 , ARG D:141
BINDING SITE FOR RESIDUE PO4 D 301
08
AC8
SOFTWARE
GLY D:156 , GLY D:216 , GLY D:217 , GLY D:238 , SER D:239
BINDING SITE FOR RESIDUE PO4 D 302
09
AC9
SOFTWARE
LYS A:190 , HIS E:118 , ARG E:140 , ARG E:141
BINDING SITE FOR RESIDUE PO4 E 301
10
BC1
SOFTWARE
GLY E:156 , GLY E:216 , GLY E:217 , GLY E:238 , SER E:239
BINDING SITE FOR RESIDUE PO4 E 302
11
BC2
SOFTWARE
HIS F:118 , ARG F:140 , ARG F:141 , LYS F:190
BINDING SITE FOR RESIDUE PO4 F 301
12
BC3
SOFTWARE
GLY F:156 , GLY F:217 , VAL F:237 , GLY F:238 , SER F:239
BINDING SITE FOR RESIDUE PO4 F 302
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(4, 24)
Info
All PROSITE Patterns/Profiles
1: PDXT_SNO_2 (G:5-214,H:5-214,I:5-214,J:5-214,K:...)
2: PDXS_SNZ_2 (A:12-282,B:12-282,C:12-282,D:12-28...)
3: PDXT_SNO_1 (G:46-56,H:46-56,I:46-56,J:46-56,K:...)
4: PDXS_SNZ_1 (A:208-226,B:208-226,C:208-226,D:20...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDXT_SNO_2
PS51130
PdxT/SNO family profile.
PDX2_PLAF7
5-214
6
G:5-214
H:5-214
I:5-214
J:5-214
K:5-214
L:5-214
2
PDXS_SNZ_2
PS51129
PdxS/SNZ family profile.
PDX1_PLABE
12-297
6
A:12-282
B:12-282
C:12-282
D:12-282
E:12-282
F:12-282
3
PDXT_SNO_1
PS01236
PdxT/SNO family family signature.
PDX2_PLAF7
46-56
6
G:46-56
H:46-56
I:46-56
J:46-56
K:46-56
L:46-56
4
PDXS_SNZ_1
PS01235
PdxS/SNZ family signature.
PDX1_PLABE
208-226
6
A:208-226
B:208-226
C:208-226
D:208-226
E:208-226
F:208-226
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (1002 KB)
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