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Getting 'Biological Unit' information from database.
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Getting 'Exon' information from database.
4AA8
Asym. Unit
Info
Asym.Unit (64 KB)
Biol.Unit 1 (117 KB)
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(1)
Title
:
BOVINE CHYMOSIN AT 1.8A RESOLUTION
Authors
:
J. Langholm Jensen, A. Molgaard, J. C. Navarro Poulsen, J. M. Van Den M. Harboe, J. B. Simonsen, K. B. Qvist, S. Larsen
Date
:
30 Nov 11 (Deposition) - 12 Dec 12 (Release) - 15 May 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Hydrolase, Aspartic Peptidase, Rennet
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Langholm Jensen, A. Molgaard, J. C. Navarro Poulsen, M. K. Harboe J. B. Simonsen, A. M. Lorentzen, K. Hjerno, J. M. Van Den Brink, K. B. Qvist, S. Larsen
Camel And Bovine Chymosin: The Relationship Between Their Structures And Cheese-Making Properties.
Acta Crystallogr. , Sect. D V. 69 901 2013
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Hetero Components
(1, 8)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
8
Ligand/Ion
CHLORIDE ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:14 , GLN A:15 , GLU A:118
BINDING SITE FOR RESIDUE CL A1324
2
AC2
SOFTWARE
GLN A:150 , ALA A:170 , ILE A:171 , HOH A:2186 , HOH A:2243
BINDING SITE FOR RESIDUE CL A1325
3
AC3
SOFTWARE
PRO A:128 , SER A:129 , HOH A:2203 , HOH A:2268
BINDING SITE FOR RESIDUE CL A1326
4
AC4
SOFTWARE
ASP A:151 , ALA A:313 , HOH A:2114 , HOH A:2230
BINDING SITE FOR RESIDUE CL A1327
5
AC5
SOFTWARE
ASN A:264 , HOH A:2260
BINDING SITE FOR RESIDUE CL A1328
6
AC6
SOFTWARE
LYS A:53 , ARG A:57 , CYS A:211 , GLN A:212
BINDING SITE FOR RESIDUE CL A1329
7
AC7
SOFTWARE
SER A:227 , GLN A:294 , HOH A:2303
BINDING SITE FOR RESIDUE CL A1330
8
AC8
SOFTWARE
SER A:273
BINDING SITE FOR RESIDUE CL A1331
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_CHYM_BOVIN_001 (G244D, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_CHYM_BOVIN_001
*
G
302
D
CHYM_BOVIN
---
---
A
G
244
D
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 3)
Info
All PROSITE Patterns/Profiles
1: PEPTIDASE_A1 (A:16-320)
2: ASP_PROTEASE (A:31-42|A:213-224)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PEPTIDASE_A1
PS51767
Peptidase family A1 domain profile.
CHYM_BOVIN
74-378
1
A:16-320
2
ASP_PROTEASE
PS00141
Eukaryotic and viral aspartyl proteases active site.
CHYM_BOVIN
89-100
271-282
2
A:31-42
A:213-224
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Exons
(8, 8)
Info
All Exons
Exon 1.2 (A:1-13)
Exon 1.3 (A:14-53)
Exon 1.4 (A:53-92)
Exon 1.5 (A:93-159)
Exon 1.6 (A:159-197)
Exon 1.7 (A:197-245)
Exon 1.8 (A:246-278)
Exon 1.9 (A:279-323)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/1.6
6: Boundary 1.6/1.7
7: Boundary 1.7/1.8
8: Boundary 1.8/1.9
9: Boundary 1.9/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000013970
1
ENSBTAE00000266971
chr3:
35631399-35631313
87
CHYM_BOVIN
1-21
21
0
-
-
1.2
ENSBTAT00000013970
2
ENSBTAE00000266969
chr3:
35628381-35628231
151
CHYM_BOVIN
21-71
51
1
A:1-13
13
1.3
ENSBTAT00000013970
3
ENSBTAE00000114008
chr3:
35627470-35627353
118
CHYM_BOVIN
72-111
40
1
A:14-53
40
1.4
ENSBTAT00000013970
4
ENSBTAE00000114011
chr3:
35626285-35626167
119
CHYM_BOVIN
111-150
40
1
A:53-92
40
1.5
ENSBTAT00000013970
5
ENSBTAE00000266967
chr3:
35624649-35624450
200
CHYM_BOVIN
151-217
67
1
A:93-159
67
1.6
ENSBTAT00000013970
6
ENSBTAE00000114017
chr3:
35623869-35623756
114
CHYM_BOVIN
217-255
39
1
A:159-197
39
1.7
ENSBTAT00000013970
7
ENSBTAE00000114020
chr3:
35622433-35622289
145
CHYM_BOVIN
255-303
49
1
A:197-245
49
1.8
ENSBTAT00000013970
8
ENSBTAE00000114021
chr3:
35621673-35621575
99
CHYM_BOVIN
304-336
33
1
A:246-278
33
1.9
ENSBTAT00000013970
9
ENSBTAE00000266965
chr3:
35620863-35620595
269
CHYM_BOVIN
337-381
45
1
A:279-323
45
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d4aa8a_ (A:)
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Protein Domains
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Organisms
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Acid proteases
(1120)
Superfamily
:
Acid proteases
(1120)
Family
:
Pepsin-like
(505)
Protein domain
:
Chymosin (synonym: renin)
(67)
Cow (Bos taurus) [TaxId: 9913]
(6)
1a
d4aa8a_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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Asym.Unit (64 KB)
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