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4A7A
Asym. Unit
Info
Asym.Unit (185 KB)
Biol.Unit 1 (178 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN MONOAMINE OXIDASE B (MAO B) IN COMPLEX WITH ROSIGLITAZONE
Authors
:
C. Binda, M. Aldeco, W. J. Geldenhuys, M. Tortorici, A. Mattevi, D. E. Ed
Date
:
11 Nov 11 (Deposition) - 25 Apr 12 (Release) - 04 Jul 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Oxidoreductase, Anti-Diabetes Drug, Parkinson'S Disease, Neurodegeneration
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Binda, M. Aldeco, W. J. Geldenhuys, M. Tortorici, A. Mattevi, D. E. Edmondson
Molecular Insights Into Human Monoamine Oxidase B Inhibition By The Glitazone Anti-Diabetes Drugs
Acs Med. Chem. Lett. V. 3 39-42 2012
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
2a: (R)-ROSIGLITAZONE (RGZa)
2b: (R)-ROSIGLITAZONE (RGZb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FAD
2
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
2
RGZ
2
Ligand/Ion
(R)-ROSIGLITAZONE
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:11 , GLY A:13 , ILE A:14 , SER A:15 , LEU A:33 , GLU A:34 , ALA A:35 , ARG A:36 , GLY A:40 , GLY A:41 , ARG A:42 , THR A:43 , GLY A:58 , SER A:59 , TYR A:60 , PRO A:234 , VAL A:235 , ALA A:263 , ILE A:264 , TRP A:388 , TYR A:393 , CYS A:397 , TYR A:398 , GLY A:425 , THR A:426 , GLY A:434 , TYR A:435 , MET A:436 , ALA A:439 , HOH A:2004 , HOH A:2005 , HOH A:2025 , HOH A:2029 , HOH A:2040 , HOH A:2080 , HOH A:2230 , HOH A:2258 , HOH A:2280 , HOH A:2398
BINDING SITE FOR RESIDUE FAD A 600
2
AC2
SOFTWARE
TYR A:60 , LEU A:164 , LEU A:171 , CYS A:172 , ILE A:198 , ILE A:199 , GLN A:206 , ILE A:316 , TYR A:326 , PHE A:343 , TYR A:435 , HOH A:2207 , HOH A:2398
BINDING SITE FOR RESIDUE RGZ A 601
3
AC3
SOFTWARE
GLY B:11 , GLY B:13 , ILE B:14 , SER B:15 , LEU B:33 , GLU B:34 , ALA B:35 , ARG B:36 , GLY B:40 , GLY B:41 , ARG B:42 , THR B:43 , GLY B:58 , SER B:59 , TYR B:60 , ARG B:233 , PRO B:234 , VAL B:235 , ALA B:263 , ILE B:264 , TRP B:388 , TYR B:393 , CYS B:397 , TYR B:398 , GLY B:425 , THR B:426 , GLY B:434 , TYR B:435 , MET B:436 , ALA B:439 , HOH B:2006 , HOH B:2007 , HOH B:2031 , HOH B:2037 , HOH B:2048 , HOH B:2087 , HOH B:2270 , HOH B:2282 , HOH B:2393
BINDING SITE FOR RESIDUE FAD B 600
4
AC4
SOFTWARE
TYR B:60 , LEU B:164 , LEU B:171 , CYS B:172 , ILE B:198 , ILE B:199 , GLN B:206 , TYR B:326 , PHE B:343 , TYR B:435 , HOH B:2226 , HOH B:2393
BINDING SITE FOR RESIDUE RGZ B 601
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
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Exons
(15, 30)
Info
All Exons
Exon 1.1a (A:3-16 | B:3-16)
Exon 1.4 (A:16-47 | B:16-47)
Exon 1.5 (A:48-93 | B:48-93)
Exon 1.6 (A:94-128 | B:94-128)
Exon 1.7 (A:129-159 | B:129-159)
Exon 1.8b (A:159-206 | B:159-206)
Exon 1.9 (A:207-256 | B:207-256)
Exon 1.10 (A:257-310 | B:257-310)
Exon 1.11 (A:310-342 | B:310-342)
Exon 1.12 (A:342-360 | B:342-360)
Exon 1.13 (A:360-379 | B:360-379)
Exon 1.14 (A:380-412 | B:380-412)
Exon 1.15a (A:412-449 | B:412-449)
Exon 1.16 (A:450-470 | B:450-470)
Exon 1.17b (A:471-501 | B:471-496)
View:
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All Exon Boundaries
01: Boundary -/1.1a
02: Boundary 1.1a/1.4
03: Boundary 1.4/1.5
04: Boundary 1.5/1.6
05: Boundary 1.6/1.7
06: Boundary 1.7/1.8b
07: Boundary 1.8b/1.9
08: Boundary 1.9/1.10
09: Boundary 1.10/1.11
10: Boundary 1.11/1.12
11: Boundary 1.12/1.13
12: Boundary 1.13/1.14
13: Boundary 1.14/1.15a
14: Boundary 1.15a/1.16
15: Boundary 1.16/1.17b
16: Boundary 1.17b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000378069
1a
ENSE00001476175
X:43741693-43741500
194
AOFB_HUMAN
1-16
16
2
A:3-16
B:3-16
14
14
1.4
ENST00000378069
4
ENSE00000847672
X:43703010-43702916
95
AOFB_HUMAN
16-47
32
2
A:16-47
B:16-47
32
32
1.5
ENST00000378069
5
ENSE00000386774
X:43698251-43698114
138
AOFB_HUMAN
48-93
46
2
A:48-93
B:48-93
46
46
1.6
ENST00000378069
6
ENSE00001035779
X:43662651-43662547
105
AOFB_HUMAN
94-128
35
2
A:94-128
B:94-128
35
35
1.7
ENST00000378069
7
ENSE00001035776
X:43661510-43661419
92
AOFB_HUMAN
129-159
31
2
A:129-159
B:129-159
31
31
1.8b
ENST00000378069
8b
ENSE00001035764
X:43656513-43656372
142
AOFB_HUMAN
159-206
48
2
A:159-206
B:159-206
48
48
1.9
ENST00000378069
9
ENSE00001035777
X:43655135-43654986
150
AOFB_HUMAN
207-256
50
2
A:207-256
B:207-256
50
50
1.10
ENST00000378069
10
ENSE00001035772
X:43652825-43652666
160
AOFB_HUMAN
257-310
54
2
A:257-310
B:257-310
54
54
1.11
ENST00000378069
11
ENSE00001035775
X:43640791-43640695
97
AOFB_HUMAN
310-342
33
2
A:310-342
B:310-342
33
33
1.12
ENST00000378069
12
ENSE00001035768
X:43639642-43639589
54
AOFB_HUMAN
342-360
19
2
A:342-360
B:342-360
19
19
1.13
ENST00000378069
13
ENSE00001035781
X:43637986-43637929
58
AOFB_HUMAN
360-379
20
2
A:360-379
B:360-379
20
20
1.14
ENST00000378069
14
ENSE00001700569
X:43634519-43634422
98
AOFB_HUMAN
380-412
33
2
A:380-412
B:380-412
33
33
1.15a
ENST00000378069
15a
ENSE00001712216
X:43628665-43628554
112
AOFB_HUMAN
412-449
38
2
A:412-449
B:412-449
38
38
1.16
ENST00000378069
16
ENSE00000668638
X:43627963-43627901
63
AOFB_HUMAN
450-470
21
2
A:450-470
B:450-470
21
21
1.17b
ENST00000378069
17b
ENSE00001332403
X:43626865-43625858
1008
AOFB_HUMAN
471-520
50
2
A:471-501
B:471-496
31
26
[
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d4a7aa2 (A:290-401)
1b: SCOP_d4a7ab2 (B:290-401)
2a: SCOP_d4a7aa1 (A:3-289,A:402-501)
2b: SCOP_d4a7ab1 (B:3-289,B:402-496)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
FAD-linked reductases, C-terminal domain
(181)
Superfamily
:
FAD-linked reductases, C-terminal domain
(181)
Family
:
L-aminoacid/polyamine oxidase
(66)
Protein domain
:
Monoamine oxidase B
(38)
Human (Homo sapiens) [TaxId: 9606]
(37)
1a
d4a7aa2
A:290-401
1b
d4a7ab2
B:290-401
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
FAD/NAD(P)-binding domain
(331)
Superfamily
:
FAD/NAD(P)-binding domain
(331)
Family
:
FAD-linked reductases, N-terminal domain
(156)
Protein domain
:
Monoamine oxidase B
(38)
Human (Homo sapiens) [TaxId: 9606]
(37)
2a
d4a7aa1
A:3-289,A:402-501
2b
d4a7ab1
B:3-289,B:402-496
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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