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4A66
Asym. Unit
Info
Asym.Unit (99 KB)
Biol.Unit 1 (94 KB)
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(1)
Title
:
MUTATIONS IN THE NEIGHBOURHOOD OF COTA-LACCASE TRINUCLEAR SITE: D116A MUTANT
Authors
:
C. S. Silva, P. F. Lindley, I. Bento
Date
:
31 Oct 11 (Deposition) - 25 Jan 12 (Release) - 28 Mar 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Oxidoreductase, Multi-Copper Oxidase, Oxidoreductase Activity, Trinuclear Cluster, Dioxygen Reduction
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
C. S. Silva, J. M. Damas, Z. Chen, V. Brissos, L. O. Martins, C. M. Soares P. F. Lindley, I. Bento
The Role Of Asp116 In The Reductive Cleavage Of Dioxygen To Water In Cota Laccase: Assistance During The Proton Transfer Mechanism
Acta Crystallogr. , Sect. D V. 68 186 2012
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Hetero Components
(3, 16)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
3a: PEROXIDE ION (PERa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CU
4
Ligand/Ion
COPPER (II) ION
2
EDO
11
Ligand/Ion
1,2-ETHANEDIOL
3
PER
1
Ligand/Ion
PEROXIDE ION
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:419 , CYS A:492 , HIS A:497 , MET A:502
BINDING SITE FOR RESIDUE CU A1512
02
AC2
SOFTWARE
HIS A:107 , HIS A:153 , HIS A:493 , PER A:1527
BINDING SITE FOR RESIDUE CU A1513
03
AC3
SOFTWARE
HIS A:155 , HIS A:424 , HIS A:491 , CU A:1515 , PER A:1527
BINDING SITE FOR RESIDUE CU A1514
04
AC4
SOFTWARE
HIS A:105 , HIS A:107 , HIS A:422 , HIS A:424 , CU A:1514 , PER A:1527 , HOH A:2137
BINDING SITE FOR RESIDUE CU A1515
05
AC5
SOFTWARE
PHE A:292 , SER A:293 , TYR A:300 , PRO A:457 , HOH A:2310
BINDING SITE FOR RESIDUE EDO A1516
06
AC6
SOFTWARE
LEU A:184 , SER A:186 , GLU A:348 , HOH A:2219 , HOH A:2267
BINDING SITE FOR RESIDUE EDO A1517
07
AC7
SOFTWARE
ARG A:136 , GLU A:137 , VAL A:138 , PRO A:247 , HOH A:2173 , HOH A:2266
BINDING SITE FOR RESIDUE EDO A1518
08
AC8
SOFTWARE
ALA A:317 , PRO A:328 , ALA A:332 , ASN A:333 , HOH A:2289 , HOH A:2447
BINDING SITE FOR RESIDUE EDO A1519
09
AC9
SOFTWARE
GLU A:364 , ARG A:429 , TRP A:463 , ALA A:478 , THR A:480
BINDING SITE FOR RESIDUE EDO A1520
10
BC1
SOFTWARE
ASP A:113 , TYR A:118 , TYR A:133 , LYS A:135 , ARG A:487 , HOH A:2147
BINDING SITE FOR RESIDUE EDO A1521
11
BC2
SOFTWARE
PRO A:284 , ARG A:285 , VAL A:287 , TYR A:358 , PRO A:458 , LYS A:461
BINDING SITE FOR RESIDUE EDO A1522
12
BC3
SOFTWARE
PHE A:81 , PRO A:83 , LEU A:206 , PHE A:207 , TYR A:208 , HOH A:2117 , HOH A:2239 , HOH A:2246
BINDING SITE FOR RESIDUE EDO A1523
13
BC4
SOFTWARE
GLU A:188 , GLU A:244 , TYR A:250 , HOH A:2224
BINDING SITE FOR RESIDUE EDO A1524
14
BC5
SOFTWARE
LYS A:25 , TYR A:69 , THR A:307 , ALA A:308 , TYR A:309 , GLU A:310
BINDING SITE FOR RESIDUE EDO A1525
15
BC6
SOFTWARE
ASN A:75 , LEU A:76 , LYS A:125 , GLN A:367 , LYS A:402
BINDING SITE FOR RESIDUE EDO A1526
16
BC7
SOFTWARE
HIS A:105 , HIS A:107 , HIS A:153 , HIS A:155 , HIS A:422 , HIS A:424 , HIS A:491 , HIS A:493 , CU A:1513 , CU A:1514 , CU A:1515 , HOH A:2194
BINDING SITE FOR RESIDUE PER A1527
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d4a66a1 (A:2-182)
1b: SCOP_d4a66a2 (A:183-356)
1c: SCOP_d4a66a3 (A:357-511)
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Class
:
All beta proteins
(24004)
Fold
:
Cupredoxin-like
(545)
Superfamily
:
Cupredoxins
(543)
Family
:
automated matches
(57)
Protein domain
:
automated matches
(57)
Bacillus subtilis [TaxId: 1423]
(7)
1a
d4a66a1
A:2-182
1b
d4a66a2
A:183-356
1c
d4a66a3
A:357-511
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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4A66
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