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3ZYM
Asym. Unit
Info
Asym.Unit (300 KB)
Biol.Unit 1 (100 KB)
Biol.Unit 2 (100 KB)
Biol.Unit 3 (100 KB)
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(1)
Title
:
STRUCTURE OF CALM (PICALM) IN COMPLEX WITH VAMP8
Authors
:
S. E. Miller, D. A. Sahlender, S. C. Graham, S. Honing, M. S. Robinson, A. D. J. Owen
Date
:
23 Aug 11 (Deposition) - 07 Dec 11 (Release) - 15 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.03
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Endocytosis, Synaptobrevin, Vamp2, Vamp3, Ap180, Plasma Membrane, Adaptor Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. E. Miller, D. A. Sahlender, S. C. Graham, S. Honing, M. S. Robinson, A. A. Peden, D. J. Owen
The Molecular Basis For The Endocytosis Of Small R-Snares B The Clathrin Adaptor Calm.
Cell(Cambridge, Mass. ) V. 147 1118 2011
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Hetero Components
(2, 13)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
2a: PHOSPHATE ION (PO4a)
2b: PHOSPHATE ION (PO4b)
2c: PHOSPHATE ION (PO4c)
2d: PHOSPHATE ION (PO4d)
2e: PHOSPHATE ION (PO4e)
2f: PHOSPHATE ION (PO4f)
2g: PHOSPHATE ION (PO4g)
View:
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Label:
No.
Name
Count
Type
Full Name
1
GOL
6
Ligand/Ion
GLYCEROL
2
PO4
7
Ligand/Ion
PHOSPHATE ION
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR A:67 , THR A:68 , LEU A:103 , PHE A:104 , ASN A:105 , ASP B:224
BINDING SITE FOR RESIDUE GOL A 2001
02
AC2
SOFTWARE
ILE A:46 , ASN A:50 , TYR A:88 , GLY A:89 , ASN A:90
BINDING SITE FOR RESIDUE GOL A 2002
03
AC3
SOFTWARE
THR B:67 , THR B:68 , LEU B:103 , PHE B:104 , ASN B:105 , HOH C:3123
BINDING SITE FOR RESIDUE GOL B 2001
04
AC4
SOFTWARE
ILE B:46 , ASN B:50 , TYR B:88 , GLY B:89 , ASN B:90 , HOH B:3073
BINDING SITE FOR RESIDUE GOL B 2002
05
AC5
SOFTWARE
ASP A:224 , THR C:67 , THR C:68 , LEU C:103 , PHE C:104 , ASN C:105
BINDING SITE FOR RESIDUE GOL C 2001
06
AC6
SOFTWARE
ILE C:46 , ASN C:50 , TYR C:88 , GLY C:89 , ASN C:90
BINDING SITE FOR RESIDUE GOL C 2002
07
AC7
SOFTWARE
ARG B:125 , ARG B:126 , ARG B:129 , LYS C:227 , LYS C:231
BINDING SITE FOR RESIDUE PO4 C 2040
08
AC8
SOFTWARE
THR A:122 , ARG A:125 , ARG A:126 , ARG A:129 , HOH A:3087
BINDING SITE FOR RESIDUE PO4 A 2039
09
AC9
SOFTWARE
HIS B:32 , ARG B:66 , ASN B:69 , HOH B:3021 , HOH B:3060 , HOH B:3064 , HOH B:3066
BINDING SITE FOR RESIDUE PO4 B 2039
10
BC1
SOFTWARE
LYS C:38 , LYS C:40 , HIS C:41
BINDING SITE FOR RESIDUE PO4 C 2041
11
BC2
SOFTWARE
LYS A:38 , LYS A:40 , HIS A:41 , HOH A:3012
BINDING SITE FOR RESIDUE PO4 A 2040
12
BC3
SOFTWARE
LYS B:38 , LYS B:40 , HIS B:41 , HOH B:3013 , HOH B:3014
BINDING SITE FOR RESIDUE PO4 B 2040
13
BC4
SOFTWARE
THR A:31 , HIS A:32 , LYS B:38
BINDING SITE FOR RESIDUE PO4 A 2041
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: ENTH (A:14-145,B:14-145,C:14-145)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ENTH
PS50942
ENTH domain profile.
PICAL_RAT
14-145
3
A:14-145
B:14-145
C:14-145
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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all CATH domains
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Pfam Domains
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Info
all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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