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3ZW9
Biol. Unit 1
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Asym.Unit (239 KB)
Biol.Unit 1 (118 KB)
Biol.Unit 2 (118 KB)
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Title
:
CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE 1 (RPMFE1) COMPLEXED WITH (2S,3S)-3-HYDROXY-2-METHYLBUTANOYL-COA
Authors
:
P. Kasaragod, W. Schmitz, J. K. Hiltunen, R. K. Wierenga
Date
:
28 Jul 11 (Deposition) - 08 Aug 12 (Release) - 03 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Beta Oxidation Pathway, Oxidoreductase, Lipid Metabolism, Lyase, Isomerase, Peroxisome, Fatty Acid Metabolism
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
P. Kasaragod, W. Schmitz, J. Kalervo Hiltunen, R. K. Wierenga
The Isomerase And Hydratase Reaction Mechanism Of The Crotonase Active Site Of The Multifunctional Enzyme (Type- 1), As Deduced From Structures Of Complexes With 3S-Hydroxy- Acyl-Coa.
Febs J. V. 280 3160 2013
(for further references see the
PDB file header
)
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADa)
1b: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADb)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
3a: (2S,3S)-3-HYDROXY-2-METHYLBUTANOYL... (T1Ga)
3b: (2S,3S)-3-HYDROXY-2-METHYLBUTANOYL... (T1Gb)
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No.
Name
Count
Type
Full Name
1
NAD
1
Ligand/Ion
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
2
SO4
1
Ligand/Ion
SULFATE ION
3
T1G
1
Ligand/Ion
(2S,3S)-3-HYDROXY-2-METHYLBUTANOYL-COA
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Sites
(4, 4)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:302 , GLY A:303 , GLY A:305 , THR A:306 , MET A:307 , VAL A:325 , GLU A:326 , SER A:327 , GLN A:331 , ALA A:380 , VAL A:381 , PHE A:382 , GLU A:383 , LYS A:388 , ASN A:408 , SER A:410 , HIS A:431 , PHE A:432
BINDING SITE FOR RESIDUE NAD A1721
2
AC2
SOFTWARE
VAL A:21 , ALA A:23 , ALA A:59 , GLY A:60 , ALA A:61 , ASP A:62 , ILE A:63 , PHE A:66 , LEU A:98 , GLY A:99 , GLY A:100 , GLU A:103 , PRO A:122 , GLU A:123 , ILE A:128 , PRO A:130 , GLY A:131 , TYR A:156 , LYS B:249
BINDING SITE FOR RESIDUE T1G A1722
3
AC3
SOFTWARE
PRO A:191 , ILE A:192 , GLU A:193 , ARG A:196
BINDING SITE FOR RESIDUE SO4 A1723
4
AC4
SOFTWARE
THR A:597 , LEU B:302 , GLY B:303 , GLY B:305 , THR B:306 , MET B:307 , VAL B:325 , GLU B:326 , SER B:327 , GLN B:331 , ALA B:380 , VAL B:381 , PHE B:382 , GLU B:383 , LYS B:388 , VAL B:391 , ASN B:408 , SER B:410 , HIS B:431 , HOH B:2028
BINDING SITE FOR RESIDUE NAD B1719
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(2, 2)
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1: ENOYL_COA_HYDRATASE (A:90-110)
2: 3HCDH (A:474-498)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ENOYL_COA_HYDRATASE
PS00166
Enoyl-CoA hydratase/isomerase signature.
ECHP_RAT
90-110
1
A:90-110
-
2
3HCDH
PS00067
3-hydroxyacyl-CoA dehydrogenase signature.
ECHP_RAT
474-498
1
A:474-498
-
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Exons
(0, 0)
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SCOP Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (239 KB)
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