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3ZVL
Asym. Unit
Info
Asym.Unit (78 KB)
Biol.Unit 1 (73 KB)
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(1)
Title
:
THE STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION BY MAMMALIAN POLYNUCLEOTIDE KINASE 3' PHOSPHATASE
Authors
:
F. Garces, L. H. Pearl, A. W. Oliver
Date
:
25 Jul 11 (Deposition) - 16 Nov 11 (Release) - 16 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase-Transferase Complex, Base Excision Repair, Ber, Non-Homologous End-Joining, Nhej, Dna Repair, Cancer
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Garces, L. H. Pearl, A. W. Oliver
The Structural Basis For Substrate Recognition By Mammalian Polynucleotide Kinase 3' Phosphatase.
Mol. Cell V. 44 385 2011
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Hetero Components
(5, 16)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
3a: S-OXY CYSTEINE (CSXa)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
5a: MAGNESIUM ION (MGa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
4
Ligand/Ion
ACETATE ION
2
CL
4
Ligand/Ion
CHLORIDE ION
3
CSX
1
Mod. Amino Acid
S-OXY CYSTEINE
4
GOL
6
Ligand/Ion
GLYCEROL
5
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:179 , SER A:189 , TRP A:191 , ARG A:192 , LYS A:241 , HOH A:2064
BINDING SITE FOR RESIDUE GOL A1523
02
AC2
SOFTWARE
ASP A:170 , ASP A:172 , ASP A:288 , HOH A:2033 , HOH A:2034 , HOH A:2036
BINDING SITE FOR RESIDUE MG A1524
03
AC3
SOFTWARE
ASP A:170 , ASN A:217 , LYS A:259 , HOH A:2205
BINDING SITE FOR RESIDUE CL A1525
04
AC4
SOFTWARE
ASN A:217 , GLN A:218 , MET A:219 , ARG A:258
BINDING SITE FOR RESIDUE CL A1526
05
AC5
SOFTWARE
PRO A:319 , PHE A:320 , GOL A:1536 , HOH A:2209
BINDING SITE FOR RESIDUE CL A1527
06
AC6
SOFTWARE
ASN A:363 , HOH A:2363 , HOH A:2369
BINDING SITE FOR RESIDUE ACT A1528
07
AC7
SOFTWARE
PRO A:185 , SER A:187 , PRO A:188 , LYS A:234 , HOH A:2040
BINDING SITE FOR RESIDUE ACT A1529
08
AC8
SOFTWARE
ALA A:375 , PRO A:501 , PHE A:502 , ARG A:503
BINDING SITE FOR RESIDUE ACT A1530
09
AC9
SOFTWARE
PHE A:372 , PRO A:373 , GLY A:374 , ALA A:375 , GLY A:376 , LYS A:377 , SER A:378 , HOH A:2374 , HOH A:2376
BINDING SITE FOR RESIDUE ACT A1531
10
BC1
SOFTWARE
LYS A:201 , TYR A:210 , PHE A:326 , GOL A:1536
BINDING SITE FOR RESIDUE GOL A1532
11
BC2
SOFTWARE
GLY A:159 , VAL A:160 , LYS A:161 , GLN A:163 , TYR A:210 , LYS A:211 , LEU A:212 , HOH A:2096 , HOH A:2112 , HOH A:2182
BINDING SITE FOR RESIDUE GOL A1533
12
BC3
SOFTWARE
PRO A:338 , HIS A:458 , ARG A:461 , PHE A:519 , SER A:520 , GLU A:521 , HOH A:2335
BINDING SITE FOR RESIDUE GOL A1534
13
BC4
SOFTWARE
ASP A:172 , ILE A:176 , THR A:177 , PRO A:185 , ASP A:190 , TRP A:191 , LYS A:234 , HOH A:2042
BINDING SITE FOR RESIDUE GOL A1535
14
BC5
SOFTWARE
PHE A:320 , CL A:1527 , GOL A:1532 , HOH A:2506 , HOH A:2507
BINDING SITE FOR RESIDUE GOL A1536
15
BC6
SOFTWARE
LYS A:182 , HOH A:2390
BINDING SITE FOR RESIDUE CL A1537
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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Asym.Unit (78 KB)
Header - Asym.Unit
Biol.Unit 1 (73 KB)
Header - Biol.Unit 1
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