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Getting 'Biological Unit' information from database.
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Getting 'Exon' information from database.
3ZUS
Asym. Unit
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Asym.Unit (1.1 MB)
Biol.Unit 1 (290 KB)
Biol.Unit 2 (290 KB)
Biol.Unit 3 (296 KB)
Biol.Unit 4 (292 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF AN ENGINEERED BOTULINUM NEUROTOXIN TYPE A-SNARE23 DERIVATIVE, LC-A-SNAP23-HN-A
Authors
:
G. Masuyer, P. Stancombe, J. A. Chaddock, K. R. Acharya
Date
:
19 Jul 11 (Deposition) - 07 Dec 11 (Release) - 15 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.95
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Hydrolase-Signaling Protein Complex, Botulinum Neurotoxin, Snare, Protein Engineering
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Masuyer, P. Stancombe, J. A. Chaddock, K. R. Acharya
Structures Of Engineered Clostridium Botulinum Neurotoxin Derivatives
Acta Crystallogr. , Sect. F V. 67 1466 2011
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
1c: ZINC ION (ZNc)
1d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ZN
4
Ligand/Ion
ZINC ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:223 , HIS A:227 , GLU A:262
BINDING SITE FOR RESIDUE ZN A1916
2
AC2
SOFTWARE
HIS B:223 , HIS B:227 , GLU B:262 , HOH B:2005
BINDING SITE FOR RESIDUE ZN B1916
3
AC3
SOFTWARE
HIS C:223 , HIS C:227 , GLU C:262
BINDING SITE FOR RESIDUE ZN C1916
4
AC4
SOFTWARE
HIS D:223 , HIS D:227 , GLU D:262 , HOH D:2003
BINDING SITE FOR RESIDUE ZN D1917
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SAPs(SNPs)/Variants
(1, 4)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_BXA1_CLOBO_001 (A27A, chain A/B/C/D, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_BXA1_CLOBO_001
*
V
27
A
BXA1_CLOBO
---
---
A/B/C/D
A
27
A
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 12)
Info
All PROSITE Patterns/Profiles
1: T_SNARE (A:171-416,B:171-416,C:171-416,D:17...)
2: ZINC_PROTEASE (A:220-229,B:220-229,C:220-229,D:22...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
T_SNARE
PS50192
t-SNARE coiled-coil homology domain profile.
SNP23_HUMAN
14-76
146-208
8
A:171-416
B:171-416
C:171-416
D:171-416
A:663-783
B:663-783
C:663-783
D:663-783
2
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
BXA1_CLOBO
220-229
4
A:220-229
B:220-229
C:220-229
D:220-229
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Exons
(7, 28)
Info
All Exons
Exon 1.2a (A:153-171 | B:153-171 | C:153-171 ...)
Exon 1.3 (A:172-238 | B:172-238 | C:172-238 ...)
Exon 1.4 (A:239-279 | B:239-279 | C:239-279 ...)
Exon 1.5 (A:279-506 (gaps) | B:279-506 (gaps...)
Exon 1.6 (A:506-659 | B:506-659 | C:506-659 ...)
Exon 1.7 (A:659-747 | B:659-747 | C:659-747 ...)
Exon 1.8c (A:748-788 | B:748-788 | C:748-788 ...)
View:
Select:
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All Exon Boundaries
1: Boundary 1.1a/1.2a
2: Boundary 1.2a/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/1.6
6: Boundary 1.6/1.7
7: Boundary 1.7/1.8c
8: Boundary 1.8c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000249647
1a
ENSE00001921361
chr15:
42787801-42787911
111
SNP23_HUMAN
-
0
0
-
-
1.2a
ENST00000249647
2a
ENSE00001107641
chr15:
42804031-42804101
71
SNP23_HUMAN
1-19
19
4
A:153-171
B:153-171
C:153-171
D:153-171
19
19
19
19
1.3
ENST00000249647
3
ENSE00000884142
chr15:
42805153-42805194
42
SNP23_HUMAN
20-33
14
4
A:172-238
B:172-238
C:172-238
D:172-238
67
67
67
67
1.4
ENST00000249647
4
ENSE00000679073
chr15:
42805597-42805645
49
SNP23_HUMAN
34-50
17
4
A:239-279
B:239-279
C:239-279
D:239-279
41
41
41
41
1.5
ENST00000249647
5
ENSE00000884144
chr15:
42807435-42807552
118
SNP23_HUMAN
50-89
40
4
A:279-506 (gaps)
B:279-506 (gaps)
C:279-506 (gaps)
D:279-506 (gaps)
165
165
166
165
1.6
ENST00000249647
6
ENSE00000679092
chr15:
42820460-42820618
159
SNP23_HUMAN
89-142
54
4
A:506-659
B:506-659
C:506-659
D:506-659
154
154
154
154
1.7
ENST00000249647
7
ENSE00000884146
chr15:
42821873-42822017
145
SNP23_HUMAN
142-190
49
4
A:659-747
B:659-747
C:659-747
D:659-747
89
89
89
89
1.8c
ENST00000249647
8c
ENSE00001950216
chr15:
42823611-42825259
1649
SNP23_HUMAN
191-211
21
4
A:748-788
B:748-788
C:748-788
D:748-788
41
41
41
41
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SCOP Domains
(0, 0)
Info
All SCOP Domains
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Show PDB file:
Asym.Unit (1.1 MB)
Header - Asym.Unit
Biol.Unit 1 (290 KB)
Header - Biol.Unit 1
Biol.Unit 2 (290 KB)
Header - Biol.Unit 2
Biol.Unit 3 (296 KB)
Header - Biol.Unit 3
Biol.Unit 4 (292 KB)
Header - Biol.Unit 4
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