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3ZRK
Biol. Unit 2
Info
Asym.Unit (137 KB)
Biol.Unit 1 (66 KB)
Biol.Unit 2 (67 KB)
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(1)
Title
:
IDENTIFICATION OF 2-(4-PYRIDYL)THIENOPYRIDINONES AS GSK-3BETA INHIBITORS
Authors
:
G. Gentile, G. Bernasconi, A. Pozzan, G. Merlo, P. Marzorati, P. Bambor B. Bax, A. Bridges, C. Brough, P. Carter, G. Cutler, M. Neu, M. Takada
Date
:
16 Jun 11 (Deposition) - 29 Jun 11 (Release) - 25 Apr 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.37
Chains
:
Asym. Unit : A,B,X,Y
Biol. Unit 1: A,X (1x)
Biol. Unit 2: B,Y (1x)
Keywords
:
Transferase-Peptide Complex, Kinase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
G. Gentile, G. Bernasconi, A. Pozzan, G. Merlo, P. Marzorati, P. Bamborough, B. Bax, A. Bridges, C. Brough, P. Carter, G. Cutler, M. Neu, M. Takada
Identification Of 2-(4-Pyridyl)Thienopyridinones As Gsk-3Beta Inhibitors.
Bioorg. Med. Chem. Lett. V. 21 4823 2011
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Hetero Components
(4, 7)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
2a: O-PHOSPHOTYROSINE (PTRa)
2b: O-PHOSPHOTYROSINE (PTRb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
4a: 2-(4-PYRIDINYL)FURO[3,2-C]PYRIDIN-... (ZRKa)
4b: 2-(4-PYRIDINYL)FURO[3,2-C]PYRIDIN-... (ZRKb)
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Label:
No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
PTR
1
Mod. Amino Acid
O-PHOSPHOTYROSINE
3
SO4
4
Ligand/Ion
SULFATE ION
4
ZRK
1
Ligand/Ion
2-(4-PYRIDINYL)FURO[3,2-C]PYRIDIN-4(5H)-ONE
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Sites
(6, 6)
Info
All Sites
1: AC7 (SOFTWARE)
2: AC8 (SOFTWARE)
3: AC9 (SOFTWARE)
4: BC1 (SOFTWARE)
5: BC2 (SOFTWARE)
6: BC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC7
SOFTWARE
VAL B:214 , SER B:215 , ILE B:217 , ARG B:220 , ARG B:223 , HOH B:2050 , HOH B:2069 , HOH B:2107
BINDING SITE FOR RESIDUE PTR B 216
2
AC8
SOFTWARE
ARG B:96 , ARG B:180 , LYS B:205 , ASN B:213 , VAL B:214
BINDING SITE FOR RESIDUE SO4 B1384
3
AC9
SOFTWARE
LYS A:297 , PRO B:154 , VAL B:155
BINDING SITE FOR RESIDUE GOL B1386
4
BC1
SOFTWARE
ARG B:96
BINDING SITE FOR RESIDUE SO4 B1390
5
BC2
SOFTWARE
LEU A:207 , VAL A:208 , ARG A:209 , HOH A:2036 , ARG B:209
BINDING SITE FOR RESIDUE SO4 B1391
6
BC3
SOFTWARE
PHE B:67 , VAL B:70 , ALA B:83 , LYS B:85 , ASP B:133 , TYR B:134 , VAL B:135 , LEU B:188 , ASP B:200 , HOH B:2039 , HOH B:2040
BINDING SITE FOR RESIDUE ZRK B1400
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (B:62-86)
2: PROTEIN_KINASE_ST (B:177-189)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
GSK3B_HUMAN
62-86
1
-
B:62-86
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
GSK3B_HUMAN
177-189
1
-
B:177-189
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Exons
(0, 0)
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All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3zrka_ (A:)
1b: SCOP_d3zrkb_ (B:)
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)
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Protein Domains
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Organisms
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)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Glycogen synthase kinase-3 beta (Gsk3b)
(35)
Human (Homo sapiens) [TaxId: 9606]
(35)
1a
d3zrka_
A:
1b
d3zrkb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Pkinase_3zrkB01 (B:56-340)
1b: PFAM_Pkinase_3zrkB02 (B:56-340)
2a: PFAM_GSK_3_bind_3zrkY01 (Y:201-222)
2b: PFAM_GSK_3_bind_3zrkY02 (Y:201-222)
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Clans
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Organisms
(
)
(
)
Clan
:
PKinase
(934)
Family
:
Pkinase
(680)
Homo sapiens (Human)
(521)
1a
Pkinase-3zrkB01
B:56-340
1b
Pkinase-3zrkB02
B:56-340
Clan
:
no clan defined [family: GSK-3_bind]
(3)
Family
:
GSK-3_bind
(3)
Homo sapiens (Human)
(3)
2a
GSK-3_bind-3zrkY01
Y:201-222
2b
GSK-3_bind-3zrkY02
Y:201-222
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Asymmetric Unit 1
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Asym.Unit (137 KB)
Header - Asym.Unit
Biol.Unit 1 (66 KB)
Header - Biol.Unit 1
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Header - Biol.Unit 2
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