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3ZPK
Asym. Unit
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Asym.Unit (54 KB)
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(1)
Title
:
ATOMIC-RESOLUTION STRUCTURE OF A CROSS-BETA QUADRUPLET AMYLOID FIBRIL DETERMINED BY SOLID-STATE MAGIC ANGLE SPINNING NMR AND CRYO-EM
Authors
:
A. W. P. Fitzpatrick, G. T. Debelouchina, M. J. Bayro, D. K. Clare, M. A. C V. S. Bajaj, C. P. Jaroniec, L. Wang, V. Ladizhansky, S. A. Muller, C. E. C. A. Waudby, H. R. Mott, A. De-Simone, T. P. J. Knowles, H. R. Saibil, M. Vendruscolo, E. V. Orlova, R. G. Griffin, C. M. Dobson
Date
:
28 Feb 13 (Deposition) - 04 Dec 13 (Release) - 05 Mar 14 (Revision)
Method
:
SOLID-STATE NMR; ELECTRON MICROSCOPY
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Keywords
:
Protein Fibril, Cross-Beta Structure
(Keyword Search:
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Reference
:
A. W. P. Fitzpatrick, G. T. Debelouchina, M. J. Bayro, D. K. Clare, M. A. Caporini, V. S. Bajaj, C. P. Jaroniec, L. Wang, V. Ladizhansky, S. A. Muller, C. E. Macphee, C. A. Waudby, H. R. Mott, A. De Simone, T. P. J. Knowles, H. R. Saibil, M. Vendruscolo, E. V. Orlova, R. G. Griffin, C. M. Dobson
Atomic Structure And Hierarchical Assembly Of A Cross-Beta Amyloid Fibril.
Proc. Natl. Acad. Sci. Usa V. 110 5468 2013
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Hetero Components
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Sites
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PROSITE Patterns/Profiles
(1, 16)
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1: TRANSTHYRETIN_2 (A:1-11,B:1-11,C:1-11,D:1-11,E:1-11...)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TRANSTHYRETIN_2
PS00769
Transthyretin signature 2.
TTHY_RAT
125-137
16
A:1-11
B:1-11
C:1-11
D:1-11
E:1-11
F:1-11
G:1-11
H:1-11
I:1-11
J:1-11
K:1-11
L:1-11
M:1-11
N:1-11
O:1-11
P:1-11
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Exons
(1, 16)
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All Exons
Exon 1.4 (A:1-11 | B:1-11 | C:1-11 | D:1-11 ...)
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All Exon Boundaries
1: Boundary 1.3/1.4
2: Boundary 1.4/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000022113
1
ENSRNOE00000155027
chr18:
12406551-12406648
98
TTHY_RAT
1-23
23
0
-
-
1.2
ENSRNOT00000022113
2
ENSRNOE00000155619
chr18:
12407695-12407825
131
TTHY_RAT
24-67
44
0
-
-
1.3
ENSRNOT00000022113
3
ENSRNOE00000156091
chr18:
12410367-12410502
136
TTHY_RAT
67-112
46
0
-
-
1.4
ENSRNOT00000022113
4
ENSRNOE00000156567
chr18:
12413430-12413680
251
TTHY_RAT
113-147
35
16
A:1-11
B:1-11
C:1-11
D:1-11
E:1-11
F:1-11
G:1-11
H:1-11
I:1-11
J:1-11
K:1-11
L:1-11
M:1-11
N:1-11
O:1-11
P:1-11
11
11
11
11
11
11
11
11
11
11
11
11
11
11
11
11
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