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Asym. Unit
Info
Asym.Unit (85 KB)
Biol.Unit 1 (158 KB)
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(1)
Title
:
M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH IMIDAZOLE
Authors
:
A. Pesce, L. Tilleman, J. Donne, E. Aste, P. Ascenzi, C. Ciaccio, M. Cole L. Moens, C. Viappiani, S. Dewilde, M. Bolognesi, M. Nardini
Date
:
18 Jan 13 (Deposition) - 26 Jun 13 (Release) - 21 Dec 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.38
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Iron-Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Pesce, L. Tilleman, J. Donne, E. Aste, P. Ascenzi, C. Ciaccio, M. Coletta, L. Moens, C. Viappiani, S. Dewilde, M. Bolognesi, M. Nardini
Structure And Haem-Distal Site Plasticity In Methanosarcina Acetivorans Protoglobin.
Plos One V. 8 66144 2013
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Hetero Components
(4, 9)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3a: IMIDAZOLE (IMDa)
4a: PHOSPHATE ION (PO4a)
4b: PHOSPHATE ION (PO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
5
Ligand/Ion
GLYCEROL
2
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
3
IMD
1
Ligand/Ion
IMIDAZOLE
4
PO4
2
Ligand/Ion
PHOSPHATE ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:70 , TYR A:73 , PHE A:74 , TYR A:85 , VAL A:89 , ARG A:92 , PHE A:93 , TRP A:96 , TYR A:112 , ARG A:119 , HIS A:120 , LYS A:125 , ASN A:126 , ILE A:137 , TYR A:141 , LEU A:142 , PHE A:145 , VAL A:182 , TRP A:185 , IMD A:449 , HOH A:2167 , HOH A:2168 , HOH A:2200 , HOH A:2208
BINDING SITE FOR RESIDUE HEM A 200
2
AC2
SOFTWARE
GLY A:12 , GLU A:13 , THR A:14 , GLU A:15 , ASN A:16 , ALA A:108 , ASP A:111 , HOH A:2019
BINDING SITE FOR RESIDUE PO4 A 201
3
AC3
SOFTWARE
TYR A:72 , VAL A:134 , PRO A:135 , ASN A:136 , GOL A:204 , HOH A:2135 , HOH A:2253 , HOH A:2254
BINDING SITE FOR RESIDUE PO4 A 202
4
AC4
SOFTWARE
GLU A:13 , ASN A:21 , LEU A:22 , GLU A:23 , GLN A:107
BINDING SITE FOR RESIDUE GOL A 203
5
AC5
SOFTWARE
SER A:66 , ARG A:122 , PRO A:135 , PO4 A:202 , HOH A:2121 , HOH A:2124 , HOH A:2251 , HOH A:2254
BINDING SITE FOR RESIDUE GOL A 204
6
AC6
SOFTWARE
LEU A:27 , ARG A:140 , TYR A:141 , HOH A:2128 , HOH A:2222 , HOH A:2253 , HOH A:2256
BINDING SITE FOR RESIDUE GOL A 205
7
AC7
SOFTWARE
PRO A:164 , GLU A:165 , TYR A:187 , PRO A:188 , VAL A:190 , LYS A:191 , TYR A:192 , HOH A:2257
BINDING SITE FOR RESIDUE GOL A 206
8
AC8
SOFTWARE
GLU A:30 , HIS A:67 , PRO A:68 , HIS A:69 , HOH A:2064
BINDING SITE FOR RESIDUE GOL A 207
9
AC9
SOFTWARE
TRP A:60 , TYR A:61 , PHE A:93 , HEM A:200
BINDING SITE FOR RESIDUE IMD A 449
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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