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3ZJJ
Biol. Unit 2
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Asym.Unit (115 KB)
Biol.Unit 1 (75 KB)
Biol.Unit 2 (73 KB)
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(1)
Title
:
PHE(93)E11LEU MUTATION OF M.ACETIVORANS PROTOGLOBIN IN COMPLEX WITH CYANIDE
Authors
:
A. Pesce, L. Tilleman, J. Donne, E. Aste, P. Ascenzi, C. Ciaccio, M. Cole L. Moens, C. Viappiani, S. Dewilde, M. Bolognesi, M. Nardini
Date
:
18 Jan 13 (Deposition) - 26 Jun 13 (Release) - 21 Dec 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: C (2x)
Biol. Unit 2: A,B (1x)
Keywords
:
Iron-Binding Protein, Haem-Distal Site Mutation, Cyanide Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Pesce, L. Tilleman, J. Donne, E. Aste, P. Ascenzi, C. Ciaccio, M. Coletta, L. Moens, C. Viappiani, S. Dewilde, M. Bolognesi, M. Nardini
Structure And Haem-Distal Site Plasticity In Methanosarcina Acetivorans Protoglobin.
Plos One V. 8 66144 2013
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Hetero Components
(4, 10)
Info
All Hetero Components
1a: CYANIDE ION (CYNa)
1b: CYANIDE ION (CYNb)
1c: CYANIDE ION (CYNc)
2a: 4-(2-HYDROXYETHYL)-1-PIPERAZINEETH... (EPEa)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
3e: GLYCEROL (GOLe)
3f: GLYCEROL (GOLf)
3g: GLYCEROL (GOLg)
4a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
4b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
4c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
5a: ISOPROPYL ALCOHOL (IPAa)
5b: ISOPROPYL ALCOHOL (IPAb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CYN
2
Ligand/Ion
CYANIDE ION
2
EPE
-1
Ligand/Ion
4-(2-HYDROXYETHYL)-1-PIPERAZINEETHANESULFONIC ACID
3
GOL
5
Ligand/Ion
GLYCEROL
4
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
5
IPA
1
Ligand/Ion
ISOPROPYL ALCOHOL
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC7 (SOFTWARE)
06: AC9 (SOFTWARE)
07: BC1 (SOFTWARE)
08: BC2 (SOFTWARE)
09: BC3 (SOFTWARE)
10: BC4 (SOFTWARE)
11: BC5 (SOFTWARE)
12: BC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LEU A:70 , TYR A:73 , PHE A:74 , TYR A:85 , VAL A:89 , ARG A:92 , LEU A:93 , TRP A:96 , TYR A:112 , ARG A:119 , HIS A:120 , LYS A:125 , ASN A:126 , ILE A:137 , TYR A:141 , PHE A:145 , ILE A:146 , ILE A:149 , VAL A:182 , TRP A:185 , CYN A:201 , HOH A:2065 , HOH A:2086 , HOH A:2087
BINDING SITE FOR RESIDUE HEM A 200
02
AC2
SOFTWARE
TRP A:60 , HEM A:200
BINDING SITE FOR RESIDUE CYN A 201
03
AC3
SOFTWARE
LEU B:70 , TYR B:73 , PHE B:74 , TYR B:85 , VAL B:89 , ARG B:92 , LEU B:93 , TRP B:96 , TYR B:112 , ARG B:119 , HIS B:120 , LYS B:125 , ASN B:126 , ILE B:137 , TYR B:141 , LEU B:142 , PHE B:145 , ILE B:146 , VAL B:182 , TRP B:185 , CYN B:201 , HOH B:2083 , HOH B:2084 , HOH B:2109
BINDING SITE FOR RESIDUE HEM B 200
04
AC4
SOFTWARE
TRP B:60 , HEM B:200
BINDING SITE FOR RESIDUE CYN B 201
05
AC7
SOFTWARE
ARG B:95 , LEU B:98 , ASN B:102 , HOH B:2053 , HOH B:2086 , GLU C:39 , GLN C:43 , SER C:101 , ASN C:102 , ARG C:103 , SER C:104 , HOH C:2028
BINDING SITE FOR RESIDUE EPE C1196
06
AC9
SOFTWARE
ASP A:24 , TYR B:73 , ARG B:140 , HOH B:2131 , HOH B:2132
BINDING SITE FOR RESIDUE GOL B1196
07
BC1
SOFTWARE
ASN A:82 , LYS A:84 , ASN A:130 , VAL A:131 , GLU A:132 , HOH A:2053 , HOH A:2095 , HOH A:2122 , ALA C:36 , GLU C:37
BINDING SITE FOR RESIDUE GOL A1196
08
BC2
SOFTWARE
LYS B:29 , PHE B:34 , GLU B:39 , SER B:104 , TYR B:105 , GOL B:1198
BINDING SITE FOR RESIDUE GOL B1197
09
BC3
SOFTWARE
HIS A:121 , ARG A:122 , PRO A:164 , HOH A:2108 , HOH A:2123 , TYR B:192 , ASP B:194
BINDING SITE FOR RESIDUE GOL A1197
10
BC4
SOFTWARE
THR B:35 , GLU B:37 , SER C:76 , ASN C:82 , VAL C:131 , GLU C:132 , HOH C:2101
BINDING SITE FOR RESIDUE GOL C1198
11
BC5
SOFTWARE
GLU B:39 , ILE B:42 , THR B:100 , SER B:101 , ASN B:102 , ARG B:103 , SER B:104 , TYR B:105 , GOL B:1197 , HOH B:2046
BINDING SITE FOR RESIDUE GOL B1198
12
BC7
SOFTWARE
ARG A:122 , PRO A:135 , ASN A:136 , HOH A:2049
BINDING SITE FOR RESIDUE IPA A1198
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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Exons
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SCOP Domains
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Asym.Unit (115 KB)
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Header - Biol.Unit 2
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