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3ZJ5
Asym. Unit
Info
Asym.Unit (494 KB)
Biol.Unit 1 (483 KB)
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(1)
Title
:
NEUROSPORA CRASSA CATALASE-3 EXPRESSED IN E. COLI, ORTHORHOMBIC FORM.
Authors
:
A. Zarate-Romero, E. Rudino-Pinera
Date
:
17 Jan 13 (Deposition) - 10 Jul 13 (Release) - 17 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Hydrogen Peroxide, Oxidoreductase, Peroxidase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Zarate-Romero, V. Stojanoff, S. P. Rojas-Trejo, W. Hansberg, E. Rudino-Pinera
Conformational Stability And Crystal Packing: Polymorphism In Neurospora Crassa Cat-3
Acta Crystallogr. , Sect. F V. 69 753 2013
[
close entry info
]
Hetero Components
(5, 31)
Info
All Hetero Components
1a: 2-(2-ETHOXYETHOXY)ETHANOL (AE3a)
1b: 2-(2-ETHOXYETHOXY)ETHANOL (AE3b)
1c: 2-(2-ETHOXYETHOXY)ETHANOL (AE3c)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
3c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
3d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
4a: TETRAETHYLENE GLYCOL (PG4a)
4b: TETRAETHYLENE GLYCOL (PG4b)
4c: TETRAETHYLENE GLYCOL (PG4c)
4d: TETRAETHYLENE GLYCOL (PG4d)
4e: TETRAETHYLENE GLYCOL (PG4e)
4f: TETRAETHYLENE GLYCOL (PG4f)
4g: TETRAETHYLENE GLYCOL (PG4g)
4h: TETRAETHYLENE GLYCOL (PG4h)
4i: TETRAETHYLENE GLYCOL (PG4i)
4j: TETRAETHYLENE GLYCOL (PG4j)
4k: TETRAETHYLENE GLYCOL (PG4k)
4l: TETRAETHYLENE GLYCOL (PG4l)
5a: D(-)-TARTARIC ACID (TARa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
AE3
3
Ligand/Ion
2-(2-ETHOXYETHOXY)ETHANOL
2
EDO
11
Ligand/Ion
1,2-ETHANEDIOL
3
HEM
4
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
PG4
12
Ligand/Ion
TETRAETHYLENE GLYCOL
5
TAR
1
Ligand/Ion
D(-)-TARTARIC ACID
[
close Hetero Component info
]
Sites
(30, 30)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:337 , VAL A:552
BINDING SITE FOR RESIDUE EDO A1718
02
AC2
SOFTWARE
ARG A:252 , GLY A:460
BINDING SITE FOR RESIDUE EDO A1719
03
AC3
SOFTWARE
TYR A:547 , HOH A:2632
BINDING SITE FOR RESIDUE PG4 A1720
04
AC4
SOFTWARE
TYR A:438 , LEU A:439 , LYS A:441 , ASN D:551
BINDING SITE FOR RESIDUE PG4 A1721
05
AC5
SOFTWARE
ASP A:611 , GLN A:612
BINDING SITE FOR RESIDUE AE3 A1722
06
AC6
SOFTWARE
ARG A:99 , VAL A:100 , VAL A:101 , HIS A:102 , ARG A:139 , GLY A:158 , VAL A:173 , GLY A:174 , ASN A:175 , PHE A:188 , ILE A:248 , HIS A:249 , PHE A:365 , LEU A:381 , ARG A:385 , SER A:388 , TYR A:389 , THR A:392 , GLN A:393 , ARG A:396 , HOH A:2106 , HOH A:2147 , HOH A:2371
BINDING SITE FOR RESIDUE HEM A4000
07
AC7
SOFTWARE
LYS B:441
BINDING SITE FOR RESIDUE EDO B1715
08
AC8
SOFTWARE
HOH B:2481
BINDING SITE FOR RESIDUE EDO B1717
09
AC9
SOFTWARE
PHE B:338 , VAL B:552 , HOH B:2610
BINDING SITE FOR RESIDUE EDO B1718
10
BC1
SOFTWARE
VAL B:552
BINDING SITE FOR RESIDUE EDO B1719
11
BC2
SOFTWARE
GLN B:652 , THR B:655 , ARG B:659 , PG4 B:1721 , HOH B:2587 , GLN C:652
BINDING SITE FOR RESIDUE PG4 B1720
12
BC3
SOFTWARE
PHE B:635 , ALA B:640 , SER B:651 , PG4 B:1720 , ARG C:659
BINDING SITE FOR RESIDUE PG4 B1721
13
BC4
SOFTWARE
TYR B:547
BINDING SITE FOR RESIDUE PG4 B1722
14
BC5
SOFTWARE
THR B:600 , GLN B:612 , HOH B:2545 , HOH B:2611
BINDING SITE FOR RESIDUE AE3 B1723
15
BC6
SOFTWARE
ARG B:99 , VAL B:100 , VAL B:101 , HIS B:102 , ARG B:139 , GLY B:158 , VAL B:173 , GLY B:174 , ASN B:175 , PHE B:180 , PHE B:188 , ILE B:248 , HIS B:249 , PHE B:365 , LEU B:381 , ARG B:385 , SER B:388 , TYR B:389 , THR B:392 , GLN B:393 , ARG B:396 , HOH B:2103 , HOH B:2106 , HOH B:2148 , HOH B:2366
BINDING SITE FOR RESIDUE HEM B4000
16
BC7
SOFTWARE
GLY C:272 , LYS C:273 , GLU C:561 , HOH C:2185 , HOH C:2186 , HOH C:2204 , HOH C:2408 , HOH C:2410 , HOH C:2413 , HOH C:2497
BINDING SITE FOR RESIDUE TAR C1717
17
BC8
SOFTWARE
ARG C:409 , PRO C:410 , GLY C:413 , HOH C:2304
BINDING SITE FOR RESIDUE EDO C1718
18
BC9
SOFTWARE
THR C:546 , HOH C:2498
BINDING SITE FOR RESIDUE PG4 C1719
19
CC1
SOFTWARE
PRO B:340 , GLY C:324
BINDING SITE FOR RESIDUE PG4 C1720
20
CC2
SOFTWARE
ASP C:611
BINDING SITE FOR RESIDUE PG4 C1721
21
CC3
SOFTWARE
ASP B:117 , SER B:119 , ASN B:120 , SER C:488 , VAL C:552
BINDING SITE FOR RESIDUE PG4 C1722
22
CC4
SOFTWARE
TYR B:115 , TRP C:118 , LEU C:341 , GLN C:342 , HOH C:2501
BINDING SITE FOR RESIDUE PG4 C1723
23
CC5
SOFTWARE
ARG C:99 , VAL C:100 , VAL C:101 , HIS C:102 , ARG C:139 , GLY C:158 , PHE C:159 , VAL C:173 , GLY C:174 , ASN C:175 , PHE C:180 , PHE C:188 , ILE C:248 , HIS C:249 , PHE C:365 , LEU C:381 , ARG C:385 , SER C:388 , TYR C:389 , THR C:392 , GLN C:393 , ARG C:396 , HOH C:2050 , HOH C:2087 , HOH C:2283
BINDING SITE FOR RESIDUE HEM C4000
24
CC6
SOFTWARE
ARG D:409 , TRP D:426
BINDING SITE FOR RESIDUE EDO D1716
25
CC7
SOFTWARE
ARG D:659 , ILE D:677
BINDING SITE FOR RESIDUE EDO D1717
26
CC8
SOFTWARE
TYR D:438 , LYS D:441 , HOH D:2298
BINDING SITE FOR RESIDUE EDO D1718
27
CC9
SOFTWARE
ALA D:473 , THR D:474
BINDING SITE FOR RESIDUE PG4 D1719
28
DC1
SOFTWARE
TYR D:547 , HOH D:2443
BINDING SITE FOR RESIDUE PG4 D1720
29
DC2
SOFTWARE
LYS A:441 , GLU D:337 , PHE D:338 , THR D:480 , HIS D:549 , ASN D:551 , VAL D:552 , HOH D:2444
BINDING SITE FOR RESIDUE AE3 D1721
30
DC3
SOFTWARE
ARG D:99 , VAL D:100 , VAL D:101 , HIS D:102 , ARG D:139 , GLY D:158 , VAL D:173 , GLY D:174 , ASN D:175 , PHE D:180 , PHE D:188 , ILE D:248 , HIS D:249 , PHE D:365 , LEU D:381 , ARG D:385 , SER D:388 , TYR D:389 , THR D:392 , GLN D:393 , ARG D:396 , HOH D:2044 , HOH D:2073 , HOH D:2256
BINDING SITE FOR RESIDUE HEM D4000
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: CATALASE_3 (A:52-542,B:52-542,C:52-542,D:52-54...)
2: CATALASE_2 (A:91-107,B:91-107,C:91-107,D:91-10...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CATALASE_3
PS51402
catalase family profile.
CAT3_NEUCR
52-542
4
A:52-542
B:52-542
C:52-542
D:52-542
2
CATALASE_2
PS00438
Catalase proximal active site signature.
CAT3_NEUCR
91-107
4
A:91-107
B:91-107
C:91-107
D:91-107
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Label:
Sorry, no Info available
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Label:
Sorry, no Info available
[
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]
Atom Selection
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)
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All Atoms
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Protein & NOT Site
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Chain A
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Chain C
Chain D
Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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