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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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Getting 'Site' information from database.
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Getting 'PROSITE' information from database.
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Getting 'Exon' information from database.
3ZGD
Asym. Unit
Info
Asym.Unit (201 KB)
Biol.Unit 1 (195 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A KEAP1 MUTANT
Authors
:
S. Hoerer, D. Reinert, K. Ostmann, Y. Hoevels, H. Nar
Date
:
17 Dec 12 (Deposition) - 12 Jun 13 (Release) - 12 Jun 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.98
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Transcription, Crystal Contact Engineering
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Horer, D. Reinert, K. Ostmann, Y. Hoevels, H. Nar
Crystal-Contact Engineering To Obtain A Crystal Form Of The Kelch Domain Of Human Keap1 Suitable For Ligand-Soaking Experiments.
Acta Crystallogr. , Sect. F V. 69 592 2013
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Hetero Components
(2, 11)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
1e: ACETATE ION (ACTe)
1f: ACETATE ION (ACTf)
1g: ACETATE ION (ACTg)
1h: ACETATE ION (ACTh)
1i: ACETATE ION (ACTi)
1j: ACETATE ION (ACTj)
2a: SODIUM ION (NAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
10
Ligand/Ion
ACETATE ION
2
NA
1
Ligand/Ion
SODIUM ION
[
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:491 , PRO A:492 , GLU A:493 , ARG A:494 , HOH A:2209
BINDING SITE FOR RESIDUE ACT A1610
02
AC2
SOFTWARE
VAL A:411 , HIS A:432 , ILE A:435 , HIS A:437 , HOH A:2127
BINDING SITE FOR RESIDUE ACT A1611
03
AC3
SOFTWARE
TYR B:334 , ARG B:380 , ASN B:382 , HOH B:2047 , HOH B:2060
BINDING SITE FOR RESIDUE ACT B1610
04
AC4
SOFTWARE
LEU B:355 , TYR B:491 , PRO B:492 , GLU B:493 , ARG B:494 , HOH B:2182
BINDING SITE FOR RESIDUE ACT B1611
05
AC5
SOFTWARE
ASP A:385 , GLY A:386 , ASN A:387 , HOH A:2074 , ARG B:415 , PHE B:478 , ARG B:483 , SER B:508
BINDING SITE FOR RESIDUE ACT B1612
06
AC6
SOFTWARE
MET A:399 , TYR A:473 , TYR A:491 , TYR A:537
BINDING SITE FOR RESIDUE ACT A1612
07
AC7
SOFTWARE
MET B:399 , TYR B:473 , TYR B:491 , TYR B:537 , HOH B:2273
BINDING SITE FOR RESIDUE ACT B1613
08
AC8
SOFTWARE
ILE A:435 , HIS A:436 , ARG A:459 , HOH A:2192
BINDING SITE FOR RESIDUE ACT A1613
09
AC9
SOFTWARE
VAL B:411 , HIS B:432 , HIS B:437 , HOH B:2112
BINDING SITE FOR RESIDUE ACT B1614
10
BC1
SOFTWARE
ARG A:380 , ASN A:387 , HOH A:2074 , HOH A:2075 , GLY B:433 , HIS B:436 , PHE B:478
BINDING SITE FOR RESIDUE ACT B1615
11
BC2
SOFTWARE
GLN A:337 , SER A:383 , HOH A:2015 , HOH A:2016 , HOH A:2017 , HOH A:2067
BINDING SITE FOR RESIDUE NA A1614
[
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SAPs(SNPs)/Variants
(6, 12)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_032105 (G333C, chain A/B, )
2: VAR_032106 (D349N, chain A/B, )
3: VAR_032107 (G350S, chain A/B, )
4: VAR_032108 (G364C, chain A/B, )
5: VAR_032109 (G430C, chain A/B, )
6: VAR_036085 (A522V, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_032105
G
333
C
KEAP1_HUMAN
Unclassified
---
A/B
G
333
C
2
UniProt
VAR_032106
D
349
N
KEAP1_HUMAN
Polymorphism
1048289
A/B
D
349
N
3
UniProt
VAR_032107
G
350
S
KEAP1_HUMAN
Unclassified
---
A/B
G
350
S
4
UniProt
VAR_032108
G
364
C
KEAP1_HUMAN
Unclassified
---
A/B
G
364
C
5
UniProt
VAR_032109
G
430
C
KEAP1_HUMAN
Unclassified
---
A/B
G
430
C
6
UniProt
VAR_036085
A
522
V
KEAP1_HUMAN
Unclassified
---
A/B
A
522
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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Exons
(4, 8)
Info
All Exons
Exon 1.4 (A:325-442 | B:325-442)
Exon 1.5 (A:442-511 | B:442-511)
Exon 1.6 (A:511-570 | B:511-570)
Exon 1.7 (A:570-609 | B:570-609)
View:
Select:
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All Exon Boundaries
1: Boundary 1.3/1.4
2: Boundary 1.4/1.5
3: Boundary 1.5/1.6
4: Boundary 1.6/1.7
5: Boundary 1.7/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2
ENST00000393623
2
ENSE00001516066
chr19:
10613481-10613373
109
KEAP1_HUMAN
-
0
0
-
-
1.3
ENST00000393623
3
ENSE00001217274
chr19:
10610756-10610071
686
KEAP1_HUMAN
1-213
213
0
-
-
1.4
ENST00000393623
4
ENSE00001217262
chr19:
10602938-10602253
686
KEAP1_HUMAN
214-442
229
2
A:325-442
B:325-442
118
118
1.5
ENST00000393623
5
ENSE00000679299
chr19:
10600529-10600324
206
KEAP1_HUMAN
442-511
70
2
A:442-511
B:442-511
70
70
1.6
ENST00000393623
6
ENSE00000679301
chr19:
10600044-10599868
177
KEAP1_HUMAN
511-570
60
2
A:511-570
B:511-570
60
60
1.7
ENST00000393623
7
ENSE00001371225
chr19:
10597494-10596796
699
KEAP1_HUMAN
570-624
55
2
A:570-609
B:570-609
40
40
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3zgda_ (A:)
1b: SCOP_d3zgdb_ (B:)
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Protein Domains
(
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(
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Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
6-bladed beta-propeller
(327)
Superfamily
:
Kelch motif
(18)
Family
:
Kelch motif
(14)
Protein domain
:
automated matches
(9)
Human (Homo sapiens) [TaxId: 9606]
(6)
1a
d3zgda_
A:
1b
d3zgdb_
B:
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Label:
Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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]
Atom Selection
(currently selected atoms:
all
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Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Chain B
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (201 KB)
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