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3ZC6
Biol. Unit 3
Info
Asym.Unit (404 KB)
Biol.Unit 1 (103 KB)
Biol.Unit 2 (103 KB)
Biol.Unit 3 (102 KB)
Biol.Unit 4 (98 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF JAK3 KINASE DOMAIN IN COMPLEX WITH AN INDAZOLE SUBSTITUTED PYRROLOPYRAZINE INHIBITOR
Authors
:
A. Kuglstatter, A. Jestel, S. Nagel, J. Boettcher, M. Blaesse
Date
:
16 Nov 12 (Deposition) - 25 Sep 13 (Release) - 25 Sep 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.42
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Transferase, Scid, Severe Combined Immunodeficiency, Stat5, Stat6, Interleukin-2, Common-Gamma Chain, Atp Site Kinase Inhibitor, Cancer
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. M. Lynch, J. Devicente, J. C. Hermann, S. Jaime-Figueroa, S. Jin, A. Kuglstatter, H. Li, A. Lovey, J. Menke, L. Niu, V. Patel, D. Roy, M. Soth, S. Steiner, P. Tivitmahaisoon, M. D. Vu, C. Yee
Strategic Use Of Conformational Bias And Structure Based Design To Identify Potent Jak3 Inhibitors With Improved Selectivity Against The Jak Family And The Kinome.
Bioorg. Med. Chem. Lett. V. 23 2793 2013
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Hetero Components
(3, 4)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
2a: DI(HYDROXYETHYL)ETHER (PEGa)
2b: DI(HYDROXYETHYL)ETHER (PEGb)
3a: TETRAETHYLENE GLYCOL (PG4a)
3b: TETRAETHYLENE GLYCOL (PG4b)
4a: O-PHOSPHOTYROSINE (PTRa)
4b: O-PHOSPHOTYROSINE (PTRb)
4c: O-PHOSPHOTYROSINE (PTRc)
4d: O-PHOSPHOTYROSINE (PTRd)
4e: O-PHOSPHOTYROSINE (PTRe)
4f: O-PHOSPHOTYROSINE (PTRf)
4g: O-PHOSPHOTYROSINE (PTRg)
4h: O-PHOSPHOTYROSINE (PTRh)
5a: N-[(2R)-1-(3-CYANOAZETIDIN-1-YL)-1... (VFCa)
5b: N-[(2R)-1-(3-CYANOAZETIDIN-1-YL)-1... (VFCb)
5c: N-[(2R)-1-(3-CYANOAZETIDIN-1-YL)-1... (VFCc)
5d: N-[(2R)-1-(3-CYANOAZETIDIN-1-YL)-1... (VFCd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
PEG
-1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
3
PG4
1
Ligand/Ion
TETRAETHYLENE GLYCOL
4
PTR
2
Mod. Amino Acid
O-PHOSPHOTYROSINE
5
VFC
1
Ligand/Ion
N-[(2R)-1-(3-CYANOAZETIDIN-1-YL)-1-OXIDANYLIDENE-PROPAN-2-YL]-2-(6-FLUORANYL-1-METHYL-INDAZOL-3-YL)-5H-PYRROLO[2,3-B]PYRAZINE-7-CARBOXAMIDE
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Sites
(2, 2)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
LEU C:828 , GLY C:829 , LYS C:830 , GLY C:831 , GLY C:834 , SER C:835 , VAL C:836 , ALA C:853 , LYS C:855 , MET C:902 , GLU C:903 , TYR C:904 , LEU C:905 , GLY C:908 , CYS C:909 , ARG C:911 , ASP C:912 , ASN C:954 , LEU C:956 , ASP C:967
BINDING SITE FOR RESIDUE VFC C2103
2
AC6
SOFTWARE
PHE C:913 , ARG C:920 , LEU C:921 , ARG C:925 , GLU C:960
BINDING SITE FOR RESIDUE PG4 C2104
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_010498 (L910S, chain C, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_010498
L
910
S
JAK3_HUMAN
Unclassified
---
C
L
910
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (C:828-855)
2: PROTEIN_KINASE_TYR (C:945-957)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
JAK3_HUMAN
828-855
1
-
-
C:828-855
-
2
PROTEIN_KINASE_TYR
PS00109
Tyrosine protein kinases specific active-site signature.
JAK3_HUMAN
945-957
1
-
-
C:945-957
-
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Exons
(0, 0)
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SCOP Domains
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Pfam Domains
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Chain C
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (404 KB)
Header - Asym.Unit
Biol.Unit 1 (103 KB)
Header - Biol.Unit 1
Biol.Unit 2 (103 KB)
Header - Biol.Unit 2
Biol.Unit 3 (102 KB)
Header - Biol.Unit 3
Biol.Unit 4 (98 KB)
Header - Biol.Unit 4
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