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3X41
Asym. Unit
Info
Asym.Unit (457 KB)
Biol.Unit 1 (449 KB)
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(1)
Title
:
COPPER AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS: PRODUCT SCHIFF-BASE FORM PRODUCED BY ANAEROBIC REDUCTION IN THE PRESENCE OF SODIUM BROMIDE
Authors
:
T. Okajima, S. Nakanishi, T. Murakawa, M. Kataoka, H. Hayashi, A. Hamag T. Nakai, Y. Kawano, H. Yamaguchi, K. Tanizawa
Date
:
10 Mar 15 (Deposition) - 19 Aug 15 (Release) - 19 Aug 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.87
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Copper Amine Oxidase, Topaquinone, Tpq, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Murakawa, A. Hamaguchi, S. Nakanishi, M. Kataoka, T. Nakai, Y. Kawano, H. Yamaguchi, H. Hayashi, K. Tanizawa, T. Okajima
Probing The Catalytic Mechanism Of Copper Amine Oxidase Fro Arthrobacter Globiformis With Halide Ions
J. Biol. Chem. 2015
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close entry info
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Hetero Components
(6, 33)
Info
All Hetero Components
1a: 2-HYDROXY-5-{[(1E)-2-PHENYLETHYLID... (2TYa)
1b: 2-HYDROXY-5-{[(1E)-2-PHENYLETHYLID... (2TYb)
2a: BROMIDE ION (BRa)
2b: BROMIDE ION (BRb)
2c: BROMIDE ION (BRc)
2d: BROMIDE ION (BRd)
2e: BROMIDE ION (BRe)
2f: BROMIDE ION (BRf)
2g: BROMIDE ION (BRg)
2h: BROMIDE ION (BRh)
3a: COPPER (II) ION (CUa)
3b: COPPER (II) ION (CUb)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
4g: GLYCEROL (GOLg)
4h: GLYCEROL (GOLh)
4i: GLYCEROL (GOLi)
4j: GLYCEROL (GOLj)
4k: GLYCEROL (GOLk)
4l: GLYCEROL (GOLl)
4m: GLYCEROL (GOLm)
4n: GLYCEROL (GOLn)
4o: GLYCEROL (GOLo)
4p: GLYCEROL (GOLp)
4q: GLYCEROL (GOLq)
5a: POTASSIUM ION (Ka)
5b: POTASSIUM ION (Kb)
6a: SODIUM ION (NAa)
6b: SODIUM ION (NAb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
2TY
2
Mod. Amino Acid
2-HYDROXY-5-{[(1E)-2-PHENYLETHYLIDENE]AMINO}-L-TYROSINE
2
BR
8
Ligand/Ion
BROMIDE ION
3
CU
2
Ligand/Ion
COPPER (II) ION
4
GOL
17
Ligand/Ion
GLYCEROL
5
K
2
Ligand/Ion
POTASSIUM ION
6
NA
2
Ligand/Ion
SODIUM ION
[
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Sites
(31, 31)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:431 , HIS A:433 , HIS A:592 , BR A:702 , HOH A:1154
BINDING SITE FOR RESIDUE CU A 701
02
AC2
SOFTWARE
2TY A:382 , HIS A:431 , HIS A:433 , HIS A:592 , MET A:602 , CU A:701
BINDING SITE FOR RESIDUE BR A 702
03
AC3
SOFTWARE
HIS A:345 , SER A:374
BINDING SITE FOR RESIDUE BR A 703
04
AC4
SOFTWARE
GLY A:34 , PRO A:35 , GLU A:36
BINDING SITE FOR RESIDUE BR A 704
05
AC5
SOFTWARE
ASP A:440 , MET A:441 , ASP A:581 , ILE A:582 , HOH A:845
BINDING SITE FOR RESIDUE NA A 705
06
AC6
SOFTWARE
VAL A:79 , THR A:80 , ALA A:93 , ALA A:94 , ARG A:148 , SER A:562 , HOH A:1087 , HOH A:1138 , HOH A:1165
BINDING SITE FOR RESIDUE K A 706
07
AC7
SOFTWARE
THR A:521 , LEU A:522 , LEU A:523 , THR A:538 , HOH A:872 , ARG B:457 , HOH B:1053
BINDING SITE FOR RESIDUE GOL A 707
08
AC8
SOFTWARE
GLU A:347 , ARG A:370 , LYS A:401 , GOL A:711 , HOH A:946 , HOH A:1007 , HOH A:1169 , HOH A:1221 , HOH B:1060 , HOH B:1142
BINDING SITE FOR RESIDUE GOL A 708
09
AC9
SOFTWARE
ASN A:368 , TYR A:391 , ASP A:393 , GLU A:397 , LYS A:610 , HOH A:1171 , HOH A:1229 , HOH B:1059
BINDING SITE FOR RESIDUE GOL A 709
10
BC1
SOFTWARE
ILE A:39 , TYR A:41 , LEU A:42 , VAL A:251 , GLN A:306 , SER A:329 , ASP A:330 , ALA A:331 , HOH A:887 , HOH A:896
BINDING SITE FOR RESIDUE GOL A 710
11
BC2
SOFTWARE
ARG A:370 , GLU A:397 , GLU A:399 , GOL A:708 , HOH A:1332 , GOL B:714
BINDING SITE FOR RESIDUE GOL A 711
12
BC3
SOFTWARE
ASP A:605 , HOH A:1187 , HOH A:1191 , HIS B:515 , LYS B:610
BINDING SITE FOR RESIDUE GOL A 712
13
BC4
SOFTWARE
GLU A:102 , THR A:378 , GLY A:380 , HOH A:827 , HOH A:1156 , HOH A:1157 , HOH A:1277 , LEU B:358
BINDING SITE FOR RESIDUE GOL A 713
14
BC5
SOFTWARE
ALA A:15 , LEU A:42 , GLY A:43 , VAL A:44 , PHE A:249 , ASP A:250 , VAL A:251 , VAL A:327 , ILE A:328 , HOH A:929
BINDING SITE FOR RESIDUE GOL A 714
15
BC6
SOFTWARE
HIS B:431 , HIS B:433 , HIS B:592 , BR B:702 , HOH B:1149
BINDING SITE FOR RESIDUE CU B 701
16
BC7
SOFTWARE
2TY B:382 , HIS B:431 , HIS B:433 , MET B:602 , CU B:701
BINDING SITE FOR RESIDUE BR B 702
17
BC8
SOFTWARE
SER B:529 , ARG B:532 , SER B:562
BINDING SITE FOR RESIDUE BR B 703
18
BC9
SOFTWARE
HIS B:345 , SER B:374 , HOH B:962
BINDING SITE FOR RESIDUE BR B 704
19
CC1
SOFTWARE
ASP B:128
BINDING SITE FOR RESIDUE BR B 705
20
CC2
SOFTWARE
GLY B:34 , PRO B:35 , GLU B:36
BINDING SITE FOR RESIDUE BR B 706
21
CC3
SOFTWARE
ASP B:440 , MET B:441 , ASP B:581 , ILE B:582 , HOH B:815
BINDING SITE FOR RESIDUE NA B 707
22
CC4
SOFTWARE
VAL B:79 , THR B:80 , ALA B:93 , ALA B:94 , SER B:562 , HOH B:952 , HOH B:1338
BINDING SITE FOR RESIDUE K B 708
23
CC5
SOFTWARE
ARG B:532 , ARG B:533 , THR B:554 , PHE B:557 , HIS B:561 , SER B:562 , GLY B:563 , GLY B:564 , ALA B:565 , HOH B:819
BINDING SITE FOR RESIDUE GOL B 709
24
CC6
SOFTWARE
ARG A:457 , THR B:521 , LEU B:522 , THR B:538 , HOH B:893 , HOH B:1192
BINDING SITE FOR RESIDUE GOL B 710
25
CC7
SOFTWARE
GLU B:347 , ARG B:370 , LYS B:401 , GOL B:714 , HOH B:930 , HOH B:1060 , HOH B:1101
BINDING SITE FOR RESIDUE GOL B 711
26
CC8
SOFTWARE
ASP B:161 , VAL B:197 , HOH B:1083 , HOH B:1204
BINDING SITE FOR RESIDUE GOL B 712
27
CC9
SOFTWARE
LYS A:610 , LEU B:590 , ASP B:605 , THR B:606
BINDING SITE FOR RESIDUE GOL B 713
28
DC1
SOFTWARE
GOL A:711 , ARG B:370 , TYR B:389 , TYR B:391 , GLU B:397 , GLU B:399 , GOL B:711
BINDING SITE FOR RESIDUE GOL B 714
29
DC2
SOFTWARE
GLU B:102 , PHE B:105 , THR B:378 , GLY B:380 , HOH B:817 , HOH B:1260 , HOH B:1268
BINDING SITE FOR RESIDUE GOL B 715
30
DC3
SOFTWARE
ILE B:39 , TYR B:41 , LEU B:42 , VAL B:251 , ILE B:328 , SER B:329 , ASP B:330 , HOH B:915
BINDING SITE FOR RESIDUE GOL B 716
31
DC4
SOFTWARE
LEU B:42 , GLY B:43 , VAL B:44 , PHE B:249 , ASP B:250 , VAL B:251 , VAL B:327 , HOH B:1018 , HOH B:1373
BINDING SITE FOR RESIDUE GOL B 717
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
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Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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Sorry, no Info available
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CATH Domains
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Sorry, no Info available
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Pfam Domains
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Sorry, no Info available
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