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3X1F
Asym. Unit
Info
Asym.Unit (125 KB)
Biol.Unit 1 (351 KB)
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(1)
Title
:
H294M MUTANT OF COPPER-CONTAINING NITRITE REDUCTASE FROM GEOBACILLUS THERMODENITRIFICANS
Authors
:
Y. Fukuda, T. Inoue
Date
:
16 Nov 14 (Deposition) - 18 Nov 15 (Release) - 18 Nov 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.35
Chains
:
Asym. Unit : A
Biol. Unit 1: A (3x)
Keywords
:
Beta Barrel, Nitrite Reduction, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Fukuda, T. Inoue
Structural Evidence Of The Flexibility Of The Cum Site
To Be Published
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Hetero Components
(3, 13)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
1b: ACETIC ACID (ACYb)
1c: ACETIC ACID (ACYc)
1d: ACETIC ACID (ACYd)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
2e: COPPER (II) ION (CUe)
2f: COPPER (II) ION (CUf)
2g: COPPER (II) ION (CUg)
3a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
3b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACY
4
Ligand/Ion
ACETIC ACID
2
CU
7
Ligand/Ion
COPPER (II) ION
3
MPD
2
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:95 , CYS A:135 , HIS A:143 , MET A:148
BINDING SITE FOR RESIDUE CU A 401
02
AC2
SOFTWARE
HIS A:100 , HIS A:134 , MET A:294 , HOH A:861
BINDING SITE FOR RESIDUE CU A 402
03
AC3
SOFTWARE
HIS A:39 , HOH A:838
BINDING SITE FOR RESIDUE CU A 403
04
AC4
SOFTWARE
HIS A:42 , GLU A:53 , HIS A:83 , HOH A:559 , HOH A:620
BINDING SITE FOR RESIDUE CU A 404
05
AC5
SOFTWARE
PRO A:191 , GLU A:239 , HIS A:298 , HOH A:530 , HOH A:845 , HOH A:849
BINDING SITE FOR RESIDUE CU A 405
06
AC6
SOFTWARE
ASP A:167 , ACY A:412 , HOH A:502 , HOH A:730 , HOH A:830 , HOH A:856
BINDING SITE FOR RESIDUE CU A 406
07
AC7
SOFTWARE
MET A:270 , HOH A:863
BINDING SITE FOR RESIDUE CU A 407
08
AC8
SOFTWARE
ASP A:98 , HIS A:134 , VAL A:246 , HOH A:733 , HOH A:861
BINDING SITE FOR RESIDUE ACY A 408
09
AC9
SOFTWARE
HOH A:507 , HOH A:741
BINDING SITE FOR RESIDUE ACY A 409
10
BC1
SOFTWARE
ASP A:163 , VAL A:166 , ASP A:167 , ARG A:168 , GLU A:169 , ARG A:229 , HOH A:669 , HOH A:829
BINDING SITE FOR RESIDUE MPD A 410
11
BC2
SOFTWARE
ASP A:55 , SER A:192 , GLN A:300 , HOH A:595
BINDING SITE FOR RESIDUE MPD A 411
12
BC3
SOFTWARE
ASP A:167 , VAL A:224 , GLY A:225 , CU A:406 , HOH A:501 , HOH A:830
BINDING SITE FOR RESIDUE ACY A 412
13
BC4
SOFTWARE
PRO A:128 , ASN A:258 , ASN A:260 , HOH A:567 , HOH A:661 , HOH A:705 , HOH A:707 , HOH A:752
BINDING SITE FOR RESIDUE ACY A 413
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (125 KB)
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