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3WSP
Asym. Unit
Info
Asym.Unit (171 KB)
Biol.Unit 1 (86 KB)
Biol.Unit 2 (84 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF P450BM3 WITH N-PERFLUORONONANOYL-L-TRYPTOPHAN
Authors
:
Z. Cong, O. Shoji, C. Kasai, H. Sugimoto, Y. Shiro, Y. Watanabe
Date
:
20 Mar 14 (Deposition) - 26 Nov 14 (Release) - 09 Dec 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Cytochrome P450, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. Cong, O. Shoji, C. Kasai, N. Kawakami, H. Sugimoto, Y. Shiro, Y. Watanabe
Activation Of Wild-Type Cytochrome P450Bm3 By The Next Generation Of Decoy Molecules: Enhanced Hydroxylation Of Gaseous Alkanes And Crystallographic Evidence.
Acs Catalysis V. 5 150 2015
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Hetero Components
(3, 6)
Info
All Hetero Components
1a: DIMETHYL SULFOXIDE (DMSa)
1b: DIMETHYL SULFOXIDE (DMSb)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
2b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
3a: N-(2,2,3,3,4,4,5,5,6,6,7,7,8,8,9,9... (W09a)
3b: N-(2,2,3,3,4,4,5,5,6,6,7,7,8,8,9,9... (W09b)
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No.
Name
Count
Type
Full Name
1
DMS
2
Ligand/Ion
DIMETHYL SULFOXIDE
2
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
3
W09
2
Ligand/Ion
N-(2,2,3,3,4,4,5,5,6,6,7,7,8,8,9,9,9-HEPTADECAFLUORONONANOYL)-L-TRYPTOPHAN
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:69 , LEU A:86 , PHE A:87 , TRP A:96 , ILE A:153 , ALA A:264 , GLY A:265 , THR A:268 , THR A:269 , PHE A:331 , PRO A:392 , PHE A:393 , GLY A:394 , ARG A:398 , ALA A:399 , CYS A:400 , ILE A:401 , GLY A:402 , DMS A:503 , HOH A:606 , HOH A:607 , HOH A:608 , HOH A:613 , HOH A:621 , HOH A:660
BINDING SITE FOR RESIDUE HEM A 501
2
AC2
SOFTWARE
PHE A:42 , ALA A:44 , ARG A:47 , THR A:49 , TYR A:51 , SER A:72 , GLN A:73 , ALA A:74 , PHE A:87 , LEU A:188 , ALA A:328 , ALA A:330 , MET A:354 , LEU A:437 , HOH A:660
BINDING SITE FOR RESIDUE W09 A 502
3
AC3
SOFTWARE
PHE A:87 , ALA A:264 , THR A:268 , ALA A:328 , HEM A:501
BINDING SITE FOR RESIDUE DMS A 503
4
AC4
SOFTWARE
LYS B:69 , LEU B:86 , PHE B:87 , TRP B:96 , PHE B:107 , ALA B:264 , THR B:268 , THR B:269 , PHE B:331 , PRO B:392 , PHE B:393 , GLY B:394 , ARG B:398 , ALA B:399 , CYS B:400 , ILE B:401 , DMS B:503 , HOH B:602 , HOH B:606 , HOH B:610 , HOH B:614 , HOH B:616 , HOH B:621
BINDING SITE FOR RESIDUE HEM B 501
5
AC5
SOFTWARE
LEU B:20 , VAL B:26 , LEU B:29 , ALA B:44 , ARG B:47 , THR B:49 , TYR B:51 , SER B:72 , GLN B:73 , ALA B:74 , PHE B:87 , MET B:185 , LEU B:188 , ALA B:328 , ALA B:330 , LEU B:437 , HOH B:616 , HOH B:774
BINDING SITE FOR RESIDUE W09 B 502
6
AC6
SOFTWARE
ALA B:264 , THR B:268 , HEM B:501
BINDING SITE FOR RESIDUE DMS B 503
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: CYTOCHROME_P450 (A:393-402,B:393-402)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CYTOCHROME_P450
PS00086
Cytochrome P450 cysteine heme-iron ligand signature.
CPXB_BACMB
394-403
2
A:393-402
B:393-402
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (171 KB)
Header - Asym.Unit
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