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3WNF
Asym. Unit
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Asym.Unit (56 KB)
Biol.Unit 1 (50 KB)
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(1)
Title
:
CYCLIC HEXAPEPTIDE CKIDNC IN COMPLEX WITH HIV-1 INTEGRASE
Authors
:
J. Wielens, D. K. Chalmers, M. W. Parker
Date
:
09 Dec 13 (Deposition) - 25 Dec 13 (Release) - 25 Dec 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.45
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Dna Integration, Aids, Integrase, Endonuclease, Polynucleotidyl Transferase, Dna Binding, Viral Protein, Rnaseh, Ledgf, Lens Epithelium-Derived Growth Factor, Viral Protein-Peptide Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. E. Northfield, J. Wielens, S. J. Headey, M. Mulcair, M. J. Scanlon, M. W. Parker, P. E. Thompson, D. K. Chalmers
Hexapeptide Mimetics Of Ledgf In Complex With Hiv-1 Integrase
To Be Published
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Hetero Components
(5, 16)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
1b: ACETYL GROUP (ACEb)
2a: CADMIUM ION (CDa)
2b: CADMIUM ION (CDb)
2c: CADMIUM ION (CDc)
2d: CADMIUM ION (CDd)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
4a: AMINO GROUP (NH2a)
4b: AMINO GROUP (NH2b)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
5e: SULFATE ION (SO4e)
5f: SULFATE ION (SO4f)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
2
Mod. Amino Acid
ACETYL GROUP
2
CD
4
Ligand/Ion
CADMIUM ION
3
CL
2
Ligand/Ion
CHLORIDE ION
4
NH2
2
Mod. Amino Acid
AMINO GROUP
5
SO4
6
Ligand/Ion
SULFATE ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:65 , GLU A:92 , ASP A:116 , CL A:1003 , HOH A:1111 , HOH B:406
BINDING SITE FOR RESIDUE CD A 1001
02
AC2
SOFTWARE
CYS A:65 , HIS A:67 , GLU A:92 , ASP B:131
BINDING SITE FOR RESIDUE CD A 1002
03
AC3
SOFTWARE
CYS A:65 , ASP A:116 , ASN A:120 , CD A:1001
BINDING SITE FOR RESIDUE CL A 1003
04
AC4
SOFTWARE
LYS A:71 , ARG A:166 , HIS A:171 , LEU A:172 , HOH A:1110 , HOH A:1157
BINDING SITE FOR RESIDUE SO4 A 1004
05
AC5
SOFTWARE
THR A:66 , HIS A:67 , LYS A:159 , ARG B:127
BINDING SITE FOR RESIDUE SO4 A 1005
06
AC6
SOFTWARE
GLY A:94 , GLY A:123 , ALA A:124 , THR A:125 , VAL A:126 , HOH A:1116 , HOH A:1165 , HOH A:1166 , NH2 D:8
BINDING SITE FOR RESIDUE SO4 A 1006
07
AC7
SOFTWARE
ASP A:131 , CYS B:65 , HIS B:67 , GLU B:92
BINDING SITE FOR RESIDUE CD B 301
08
AC8
SOFTWARE
HOH A:1107 , CYS B:65 , GLU B:92 , ASP B:116 , CL B:303 , HOH B:410
BINDING SITE FOR RESIDUE CD B 302
09
AC9
SOFTWARE
CYS B:65 , ASP B:116 , ASN B:120 , CD B:302
BINDING SITE FOR RESIDUE CL B 303
10
BC1
SOFTWARE
LYS B:71 , ARG B:166 , HIS B:171 , LEU B:172 , HOH B:411 , HOH B:455
BINDING SITE FOR RESIDUE SO4 B 304
11
BC2
SOFTWARE
ARG A:127 , THR B:66 , HIS B:67 , LYS B:159
BINDING SITE FOR RESIDUE SO4 B 305
12
BC3
SOFTWARE
GLY B:94 , GLY B:123 , ALA B:124 , THR B:125 , VAL B:126 , HOH B:425 , HOH B:440 , HOH B:463 , HOH B:464 , NH2 C:8
BINDING SITE FOR RESIDUE SO4 B 306
13
BC4
SOFTWARE
ASP A:167 , GLN A:168 , ALA A:169 , GLU A:170 , HIS A:171 , THR A:174 , HOH A:1121 , GLN B:95 , ALA B:124 , THR B:125 , GLY B:189 , SO4 B:306 , HOH C:101
BINDING SITE FOR CHAIN C OF CKIDNC PEPTIDE
14
BC5
SOFTWARE
GLN A:95 , ALA A:124 , THR A:125 , ALA A:128 , SO4 A:1006 , ASP B:167 , GLN B:168 , ALA B:169 , GLU B:170 , HIS B:171 , THR B:174 , HOH B:408 , HOH B:454
BINDING SITE FOR CHAIN D OF CKIDNC PEPTIDE
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (56 KB)
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