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Asym. Unit
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Asym.Unit (79 KB)
Biol.Unit 1 (75 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ERP46 TRX2
Authors
:
K. Inaba, M. Suzuki, R. Kojima
Date
:
04 Aug 13 (Deposition) - 25 Jun 14 (Release) - 25 Jun 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
0.95
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Pdi Family Member, Thioredoxin Domain, Protein Disulfide Isomerase, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Kojima, M. Okumura, S. Masui, S. Kanemura, M. Inoue, M. Saiki, H. Yamaguchi, T. Hikima, M. Suzuki, S. Akiyama, K. Inaba
Radically Different Thioredoxin Domain Arrangement Of Erp46 An Efficient Disulfide Bond Introducer Of The Mammalian Pdi Family
Structure V. 22 431 2014
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:191 , TYR A:192 , GLU A:193 , GLN A:229 , GLY A:233 , ARG A:287 , HOH A:442 , HOH A:513 , HOH A:514
BINDING SITE FOR RESIDUE GOL A 301
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: THIOREDOXIN_2 (-|A:190-295|-)
2: THIOREDOXIN_1 (-|A:209-227|-)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
THIOREDOXIN_2
PS51352
Thioredoxin domain profile.
TXND5_HUMAN
36-169
170-295
304-429
1
-
A:190-295
-
2
THIOREDOXIN_1
PS00194
Thioredoxin family active site.
TXND5_HUMAN
81-99
209-227
342-360
1
-
A:209-227
-
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Exons
(5, 5)
Info
All Exons
Exon 1.3 (A:186-187)
Exon 1.5b (A:188-206)
Exon 1.6 (A:206-244)
Exon 1.7 (A:245-273)
Exon 1.8c (A:274-296)
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All Exon Boundaries
1: Boundary 1.1/1.3
2: Boundary 1.3/1.4b
3: Boundary 1.4b/1.5b
4: Boundary 1.5b/1.6
5: Boundary 1.6/1.7
6: Boundary 1.7/1.8c
7: Boundary 1.8c/1.9
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000379757
1
ENSE00001482400
chr6:
7911047-7910747
301
TXND5_HUMAN
1-88
88
0
-
-
1.3
ENST00000379757
3
ENSE00002035816
chr6:
7904956-7904807
150
TXND5_HUMAN
88-138
51
1
A:186-187
2
1.4b
ENST00000379757
4b
ENSE00002030712
chr6:
7899914-7899809
106
TXND5_HUMAN
138-173
36
0
-
-
1.5b
ENST00000379757
5b
ENSE00002020031
chr6:
7895435-7895339
97
TXND5_HUMAN
174-206
33
1
A:188-206
19
1.6
ENST00000379757
6
ENSE00002062288
chr6:
7891969-7891854
116
TXND5_HUMAN
206-244
39
1
A:206-244
39
1.7
ENST00000379757
7
ENSE00002051337
chr6:
7889814-7889728
87
TXND5_HUMAN
245-273
29
1
A:245-273
29
1.8c
ENST00000379757
8c
ENSE00002072823
chr6:
7889081-7888938
144
TXND5_HUMAN
274-321
48
1
A:274-296
23
1.9
ENST00000379757
9
ENSE00002061487
chr6:
7886276-7886194
83
TXND5_HUMAN
322-349
28
0
-
-
1.10
ENST00000379757
10
ENSE00002026226
chr6:
7884721-7884592
130
TXND5_HUMAN
349-392
44
0
-
-
1.11c
ENST00000379757
11c
ENSE00001964269
chr6:
7883499-7881750
1750
TXND5_HUMAN
393-432
40
0
-
-
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SCOP Domains
(0, 0)
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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