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3W7A
Asym. Unit
Info
Asym.Unit (284 KB)
Biol.Unit 1 (140 KB)
Biol.Unit 2 (140 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF AZOREDUCTASE AZRC FIN COMPLEX WITH SULFONE-MODIFIED AZO DYE ACID RED 88
Authors
:
J. Yu, D. Ogata, T. Ooi, M. Yao
Date
:
27 Feb 13 (Deposition) - 12 Feb 14 (Release) - 12 Feb 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Azoreductase, Azo Bond Cleavage, Fmn-Binding, Azoreductase- Azoreductase Substrate Complex, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. Yu, D. Ogata, Z. Gai, S. Taguchi, I. Tanaka, T. Ooi, M. Yao
Structures Of Azra And Of Azrc Complexed With Substrate Or Inhibitor: Insight Into Substrate Specificity And Catalytic Mechanism
Acta Crystallogr. , Sect. D V. 70 553 2014
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Hetero Components
(4, 15)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
2a: FLAVIN MONONUCLEOTIDE (FMNa)
2b: FLAVIN MONONUCLEOTIDE (FMNb)
2c: FLAVIN MONONUCLEOTIDE (FMNc)
2d: FLAVIN MONONUCLEOTIDE (FMNd)
3a: POTASSIUM ION (Ka)
3b: POTASSIUM ION (Kb)
3c: POTASSIUM ION (Kc)
3d: POTASSIUM ION (Kd)
4a: 4-[(E)-(2-HYDROXYNAPHTHALEN-1-YL)D... (RE8a)
4b: 4-[(E)-(2-HYDROXYNAPHTHALEN-1-YL)D... (RE8b)
4c: 4-[(E)-(2-HYDROXYNAPHTHALEN-1-YL)D... (RE8c)
4d: 4-[(E)-(2-HYDROXYNAPHTHALEN-1-YL)D... (RE8d)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
3
Ligand/Ion
CALCIUM ION
2
FMN
4
Ligand/Ion
FLAVIN MONONUCLEOTIDE
3
K
4
Ligand/Ion
POTASSIUM ION
4
RE8
4
Ligand/Ion
4-[(E)-(2-HYDROXYNAPHTHALEN-1-YL)DIAZENYL]NAPHTHALENE-1-SULFONIC ACID
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:10 , SER A:17 , PHE A:18 , GLY A:19 , PRO A:101 , MET A:102 , TRP A:103 , ASN A:104 , PHE A:105 , ALA A:146 , THR A:147 , GLY A:148 , GLY A:149 , TYR A:151 , MET A:186 , ASN A:187 , RE8 A:302 , HOH A:404 , HOH A:430 , HOH A:450 , HOH A:451
BINDING SITE FOR RESIDUE FMN A 301
02
AC2
SOFTWARE
TYR A:151 , ASN A:187 , FMN A:301 , HOH A:457 , PHE B:125 , TYR B:127 , PHE B:172
BINDING SITE FOR RESIDUE RE8 A 302
03
AC3
SOFTWARE
PHE A:125 , TYR A:127 , PHE A:172 , ASN B:104 , ASN B:187 , FMN B:301
BINDING SITE FOR RESIDUE RE8 A 303
04
AC4
SOFTWARE
ASN A:203 , HOH A:439 , HOH A:459
BINDING SITE FOR RESIDUE CA A 304
05
AC5
SOFTWARE
GLU A:24 , GLU A:28 , HOH A:464 , GLU C:24
BINDING SITE FOR RESIDUE K A 305
06
AC6
SOFTWARE
ILE A:52 , RE8 A:303 , ASN B:10 , SER B:17 , PHE B:18 , GLY B:19 , PRO B:101 , MET B:102 , TRP B:103 , ASN B:104 , PHE B:105 , ALA B:146 , THR B:147 , GLY B:148 , GLY B:149 , TYR B:151 , MET B:186 , ASN B:187 , HOH B:409 , HOH B:438
BINDING SITE FOR RESIDUE FMN B 301
07
AC7
SOFTWARE
THR B:8 , ALA B:9 , ASN B:10 , ASP B:43
BINDING SITE FOR RESIDUE K B 302
08
AC8
SOFTWARE
ASN C:10 , SER C:17 , PHE C:18 , GLY C:19 , PRO C:101 , MET C:102 , TRP C:103 , ASN C:104 , PHE C:105 , ALA C:146 , THR C:147 , GLY C:148 , GLY C:149 , TYR C:151 , MET C:186 , ASN C:187 , RE8 C:302 , HOH C:402 , HOH C:434 , HOH C:437
BINDING SITE FOR RESIDUE FMN C 301
09
AC9
SOFTWARE
ASN C:104 , PHE C:105 , TYR C:151 , ASN C:187 , FMN C:301 , HOH C:437 , PHE D:125 , TYR D:127 , PRO D:132 , PHE D:172
BINDING SITE FOR RESIDUE RE8 C 302
10
BC1
SOFTWARE
PHE C:125 , TYR C:127 , PRO C:132 , PHE C:172 , TYR D:151 , ASN D:187 , FMN D:301
BINDING SITE FOR RESIDUE RE8 C 303
11
BC2
SOFTWARE
ASN C:203 , HOH C:452 , HOH C:460 , HOH C:468 , HOH C:470
BINDING SITE FOR RESIDUE CA C 304
12
BC3
SOFTWARE
THR C:8 , ASN C:10 , ASP C:43 , HOH C:431
BINDING SITE FOR RESIDUE K C 305
13
BC4
SOFTWARE
VAL C:39 , HOH C:405 , HOH C:450 , HOH C:458 , HOH C:471 , HOH C:472
BINDING SITE FOR RESIDUE CA C 306
14
BC5
SOFTWARE
GLU A:24 , HOH A:442 , GLU C:24 , GLU C:28
BINDING SITE FOR RESIDUE K C 307
15
BC6
SOFTWARE
RE8 C:303 , ASN D:10 , SER D:17 , PHE D:18 , GLY D:19 , PRO D:101 , MET D:102 , TRP D:103 , ASN D:104 , PHE D:105 , ALA D:146 , THR D:147 , GLY D:148 , GLY D:149 , TYR D:151 , MET D:186 , ASN D:187 , HOH D:413 , HOH D:418
BINDING SITE FOR RESIDUE FMN D 301
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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CATH Domains
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Asymmetric Unit 1
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