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Asym. Unit
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Asym.Unit (89 KB)
Biol.Unit 1 (83 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PCRB FROM BACILLUS SUBTILIS SUBAP. SUBTILIS STR. 168
Authors
:
F. Ren, X. Feng, T. P. Ko, C. H. Huang, Y. Hu, H. C. Chan, Y. L. Liu, K. Wang, C X. Pang, M. He, Y. Li, E. Oldfield, R. T. Guo
Date
:
17 Oct 12 (Deposition) - 26 Dec 12 (Release) - 31 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.54
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Biosynthesis, Prenyltransferases, Enzyme Catalysis, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Ren, X. Feng, T. P. Ko, C. H. Huang, Y. Hu, H. C. Chan, Y. L. Liu, K. Wang, C. C. Chen, X. Pang, M. He, Y. Li, E. Oldfield, R. T. Guo
Insights Into Tim-Barrel Prenyl Transferase Mechanisms: Crystal Structures Of Pcrb From Bacillus Subtilis And Staphylococcus Aureus
Chembiochem V. 14 195 2013
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Hetero Components
(2, 15)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
2e: MAGNESIUM ION (MGe)
2f: MAGNESIUM ION (MGf)
2g: MAGNESIUM ION (MGg)
2h: MAGNESIUM ION (MGh)
2i: MAGNESIUM ION (MGi)
2j: MAGNESIUM ION (MGj)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
5
Ligand/Ion
CHLORIDE ION
2
MG
10
Ligand/Ion
MAGNESIUM ION
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:56 , PHE A:58 , MG A:706 , HOH A:828 , HOH A:829 , HOH A:830 , HOH A:978
BINDING SITE FOR RESIDUE MG A 701
02
AC2
SOFTWARE
ASP A:203 , MG A:704 , HOH A:815 , HOH A:816 , HOH A:971 , HOH A:1019
BINDING SITE FOR RESIDUE MG A 702
03
AC3
SOFTWARE
GLU A:45 , ASP A:46 , HOH A:956 , GLU B:70 , HOH B:491 , HOH B:492
BINDING SITE FOR RESIDUE MG A 703
04
AC4
SOFTWARE
THR A:5 , MG A:702 , HOH A:815 , HOH A:817 , HOH A:971 , HOH A:1040 , HOH A:1076
BINDING SITE FOR RESIDUE MG A 704
05
AC5
SOFTWARE
HOH A:939 , HOH A:979 , HOH A:980 , HOH A:1025 , HOH A:1042
BINDING SITE FOR RESIDUE MG A 705
06
AC6
SOFTWARE
MG A:701 , HOH A:828 , HOH A:830 , HOH A:831 , HOH A:978
BINDING SITE FOR RESIDUE MG A 706
07
AC7
SOFTWARE
LEU A:59
BINDING SITE FOR RESIDUE CL A 707
08
AC8
SOFTWARE
TYR A:2 , ASP A:3 , HOH A:838
BINDING SITE FOR RESIDUE CL A 708
09
AC9
SOFTWARE
HOH A:853
BINDING SITE FOR RESIDUE CL A 709
10
BC1
SOFTWARE
LEU A:19
BINDING SITE FOR RESIDUE CL A 710
11
BC2
SOFTWARE
ARG B:56 , PHE B:58 , HOH B:473 , HOH B:474 , HOH B:505 , HOH B:506
BINDING SITE FOR RESIDUE MG B 301
12
BC3
SOFTWARE
THR B:5 , MG B:303 , HOH B:440 , HOH B:442 , HOH B:444 , HOH B:511
BINDING SITE FOR RESIDUE MG B 302
13
BC4
SOFTWARE
ASP B:203 , MG B:302 , HOH B:440 , HOH B:510 , HOH B:511 , HOH B:512
BINDING SITE FOR RESIDUE MG B 303
14
BC5
SOFTWARE
GLU A:70 , HOH A:954 , HOH A:955 , GLU B:45 , ASP B:46 , HOH B:490
BINDING SITE FOR RESIDUE MG B 304
15
BC6
SOFTWARE
HOH A:956 , GLU B:45
BINDING SITE FOR RESIDUE CL B 305
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3vzxa_ (A:)
1b: SCOP_d3vzxb_ (B:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
FMN-linked oxidoreductases
(290)
Family
:
FMN-linked oxidoreductases
(242)
Protein domain
:
PcrB protein homolog YerE
(7)
Bacillus subtilis [TaxId: 1423]
(5)
1a
d3vzxa_
A:
1b
d3vzxb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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Sorry, no Info available
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Asymmetric Unit 1
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Asym.Unit (89 KB)
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