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3VRO
Asym. Unit
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Asym.Unit (56 KB)
Biol.Unit 1 (52 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE TYROSINE KINASE BINDING DOMAIN OF CBL-C IN COMPLEX WITH PHOSPHO-SRC PEPTIDE
Authors
:
K. Takeshita, T. Tezuka, Y. Isozaki, E. Yamashita, M. Suzuki, Y. Yamana T. Yamamoto, A. Nakagawa
Date
:
13 Apr 12 (Deposition) - 06 Mar 13 (Release) - 06 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Ptb Domain, Tkb (Tyrosine Kinase Binding) Domain, Four-Helix Bundle (4H), Calcium-Binding Ef Hand, Divergent Sh2 Domain, Regulator Of Egfr Mediated Signal Transduction, Ubiquitously Expressed, Protein Binding-Transferase Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Takeshita, T. Tezuka, Y. Isozaki, E. Yamashita, M. Suzuki, M. Kim, Y. Yamanashi, T. Yamamoto, A. Nakagawa
Structural Flexibility Regulates Phosphopeptide-Binding Activity Of The Tyrosine Kinase Binding Domain Of Cbl-C.
J. Biochem. V. 152 487 2012
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: O-PHOSPHOTYROSINE (PTRa)
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Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
PTR
1
Mod. Amino Acid
O-PHOSPHOTYROSINE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:199 , THR A:201 , SER A:203 , HIS A:205 , GLU A:210 , HOH A:502
BINDING SITE FOR RESIDUE CA A 401
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(1, 1)
Info
All Exons
Exon 1.15b (B:417-421)
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All Exon Boundaries
1: Boundary 1.14a/1.15b
2: Boundary 1.15b/1.16a
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2b
ENST00000373578
2b
ENSE00001460945
chr20:
35974557-35974658
102
SRC_HUMAN
-
0
0
-
-
1.3
ENST00000373578
3
ENSE00001460974
chr20:
35993607-35993680
74
SRC_HUMAN
-
0
0
-
-
1.4d
ENST00000373578
4d
ENSE00001460973
chr20:
36011022-36011190
169
SRC_HUMAN
-
0
0
-
-
1.6b
ENST00000373578
6b
ENSE00000661877
chr20:
36012553-36012806
254
SRC_HUMAN
1-84
84
0
-
-
1.7b
ENST00000373578
7b
ENSE00000661878
chr20:
36014478-36014577
100
SRC_HUMAN
84-117
34
0
-
-
1.9b
ENST00000373578
9b
ENSE00000661879
chr20:
36022298-36022396
99
SRC_HUMAN
117-150
34
0
-
-
1.9d
ENST00000373578
9d
ENSE00000661880
chr20:
36022577-36022680
104
SRC_HUMAN
150-185
36
0
-
-
1.10
ENST00000373578
10
ENSE00000661881
chr20:
36024565-36024714
150
SRC_HUMAN
185-235
51
0
-
-
1.12b
ENST00000373578
12b
ENSE00000661882
chr20:
36026102-36026257
156
SRC_HUMAN
235-287
53
0
-
-
1.13a
ENST00000373578
13a
ENSE00001654044
chr20:
36028518-36028697
180
SRC_HUMAN
287-347
61
0
-
-
1.14a
ENST00000373578
14a
ENSE00000800501
chr20:
36030005-36030081
77
SRC_HUMAN
347-372
26
0
-
-
1.15b
ENST00000373578
15b
ENSE00000661885
chr20:
36030838-36030991
154
SRC_HUMAN
373-424
52
1
B:417-421
5
1.16a
ENST00000373578
16a
ENSE00001785449
chr20:
36031152-36031283
132
SRC_HUMAN
424-468
45
0
-
-
1.17c
ENST00000373578
17c
ENSE00001460955
chr20:
36031574-36034453
2880
SRC_HUMAN
468-536
69
0
-
-
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Pfam Domains
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Asym.Unit (56 KB)
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