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3VN3
Biol. Unit 1
Info
Asym.Unit (165 KB)
Biol.Unit 1 (81 KB)
Biol.Unit 2 (82 KB)
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(1)
Title
:
FUNGAL ANTIFREEZE PROTEIN EXERTS HYPERACTIVITY BY CONSTRUCTING AN INEQUABLE BETA-HELIX
Authors
:
H. Kondo, N. Xiao, Y. Hanada, H. Sugimoto, T. Hoshino, C. P. Garnham, P. L S. Tsuda
Date
:
21 Dec 11 (Deposition) - 06 Jun 12 (Release) - 17 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
0.95
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Right-Handed Beta-Helix, Antifreeze Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
H. Kondo, Y. Hanada, H. Sugimoto, T. Hoshino, C. P. Garnham, P. L. Davies, S. Tsuda
Ice-Binding Site Of Snow Mold Fungus Antifreeze Protein Deviates From Structural Regularity And High Conservation
Proc. Natl. Acad. Sci. Usa V. 109 9360 2012
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
2a: 3-IODO-TYROSINE (IYRa)
2b: 3-IODO-TYROSINE (IYRb)
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No.
Name
Count
Type
Full Name
1
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
2
IYR
1
Mod. Amino Acid
3-IODO-TYROSINE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC6 (SOFTWARE)
6: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:5 , VAL A:6 , LYS A:167 , ILE A:170 , HOH A:424 , HOH A:589
BINDING SITE FOR RESIDUE EDO A 301
2
AC2
SOFTWARE
PHE A:102 , TYR A:106 , THR A:114 , LEU A:116 , TYR A:120
BINDING SITE FOR RESIDUE EDO A 302
3
AC3
SOFTWARE
ASN A:13 , TYR A:14 , ALA A:33 , THR A:107 , HOH A:461 , HOH A:463
BINDING SITE FOR RESIDUE EDO A 303
4
AC4
SOFTWARE
ALA A:109 , GLY A:111 , HOH A:703 , HOH B:637
BINDING SITE FOR RESIDUE EDO A 304
5
AC6
SOFTWARE
THR A:31 , HOH A:572 , LYS B:156 , HOH B:446 , HOH B:453 , HOH B:483
BINDING SITE FOR RESIDUE EDO B 302
6
AC7
SOFTWARE
HOH A:423 , HOH A:425 , TYR B:106 , ALA B:109 , GLY B:111 , HOH B:653
BINDING SITE FOR RESIDUE EDO B 303
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Chain A
Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (165 KB)
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Biol.Unit 1 (81 KB)
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Biol.Unit 2 (82 KB)
Header - Biol.Unit 2
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