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Asym. Unit
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Asym.Unit (264 KB)
Biol.Unit 1 (258 KB)
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(1)
Title
:
REDUCED CARBAZOLE-BOUND COMPLEX BETWEEN OXYGENASE AND FERREDOXIN IN CARBAZOLE 1,9A-DIOXYGENASE
Authors
:
Y. Ashikawa, H. Nojiri
Date
:
12 Dec 11 (Deposition) - 22 Aug 12 (Release) - 22 Aug 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Catalytic Mechanism, Electron Transfer Complex, Rieske Nonheme Iron Oxygenase System, Terminal Oxygenase, Rieske-Type Ferredoxin, Carbazole 1, 9A-Dioxygenase, Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
Y. Ashikawa, Z. Fujimoto, Y. Usami, K. Inoue, H. Noguchi, H. Yamane, H. Nojiri
Structural Insight Into The Substrate- And Dioxygenbinding Manner In The Catalytic Cycle Of Rieske Nonheme Iron Oxygenase System, Carbazole 1, 9Adioxygenase
Bmc Struct. Biol. V. 12 15 2012
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Hetero Components
(3, 11)
Info
All Hetero Components
1a: 9H-CARBAZOLE (9CAa)
1b: 9H-CARBAZOLE (9CAb)
2a: FE (II) ION (FE2a)
2b: FE (II) ION (FE2b)
2c: FE (II) ION (FE2c)
3a: FE2/S2 (INORGANIC) CLUSTER (FESa)
3b: FE2/S2 (INORGANIC) CLUSTER (FESb)
3c: FE2/S2 (INORGANIC) CLUSTER (FESc)
3d: FE2/S2 (INORGANIC) CLUSTER (FESd)
3e: FE2/S2 (INORGANIC) CLUSTER (FESe)
3f: FE2/S2 (INORGANIC) CLUSTER (FESf)
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No.
Name
Count
Type
Full Name
1
9CA
2
Ligand/Ion
9H-CARBAZOLE
2
FE2
3
Ligand/Ion
FE (II) ION
3
FES
6
Ligand/Ion
FE2/S2 (INORGANIC) CLUSTER
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:183 , HIS A:187 , ASP A:333 , HOH A:887
BINDING SITE FOR RESIDUE FE2 A 501
02
AC2
SOFTWARE
CYS A:69 , HIS A:71 , ARG A:72 , CYS A:90 , HIS A:93 , TRP A:95
BINDING SITE FOR RESIDUE FES A 401
03
AC3
SOFTWARE
HIS B:183 , HIS B:187 , ASP B:333 , HOH B:889 , HOH B:943
BINDING SITE FOR RESIDUE FE2 B 501
04
AC4
SOFTWARE
CYS B:69 , HIS B:71 , ARG B:72 , CYS B:90 , HIS B:93 , TRP B:95
BINDING SITE FOR RESIDUE FES B 401
05
AC5
SOFTWARE
GLY B:178 , ASP B:180 , HIS B:183 , ILE B:184 , ILE B:262 , LEU B:270 , GLN B:282 , GLU B:284 , PHE B:329 , ASN B:330
BINDING SITE FOR RESIDUE 9CA B 2001
06
AC6
SOFTWARE
HIS C:183 , HIS C:187 , ASP C:333 , HOH C:888 , HOH C:1060
BINDING SITE FOR RESIDUE FE2 C 501
07
AC7
SOFTWARE
CYS C:69 , HIS C:71 , ARG C:72 , VAL C:74 , CYS C:90 , TYR C:92 , HIS C:93 , ALA C:94 , TRP C:95
BINDING SITE FOR RESIDUE FES C 401
08
AC8
SOFTWARE
GLY C:178 , HIS C:183 , ILE C:184 , ALA C:259 , ILE C:262 , LEU C:270 , VAL C:272 , PHE C:275 , GLN C:282 , PHE C:329 , ASN C:330
BINDING SITE FOR RESIDUE 9CA C 2002
09
AC9
SOFTWARE
CYS D:46 , HIS D:48 , GLY D:49 , CYS D:65 , HIS D:68 , GLY D:70 , HOH D:187
BINDING SITE FOR RESIDUE FES D 201
10
BC1
SOFTWARE
CYS E:46 , HIS E:48 , GLY E:49 , CYS E:65 , HIS E:68 , GLY E:70
BINDING SITE FOR RESIDUE FES E 201
11
BC2
SOFTWARE
CYS F:46 , HIS F:48 , GLY F:49 , CYS F:65 , HIS F:68 , GLY F:70
BINDING SITE FOR RESIDUE FES F 201
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: RIESKE (D:6-102,E:6-102,F:6-102)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RIESKE
PS51296
Rieske [2Fe-2S] iron-sulfur domain profile.
CARAC_PSERE
6-102
3
D:6-102
E:6-102
F:6-102
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (264 KB)
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