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3VLN
Asym. Unit
Info
Asym.Unit (93 KB)
Biol.Unit 1 (174 KB)
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(1)
Title
:
HUMAN GLUTATHIONE TRANSFERASE O1-1 C32S MUTANT IN COMPLEX WITH ASCORBIC ACID
Authors
:
J. Brock, P. G. Board, A. J. Oakley
Date
:
02 Dec 11 (Deposition) - 16 May 12 (Release) - 26 Jun 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Gst Fold, Reductase, Glutathione, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Zhou, J. Brock, D. Liu, P. G. Board, A. J. Oakley
Structural Insights Into The Dehydroascorbate Reductase Activity Of Human Omega-Class Glutathione Transferases.
J. Mol. Biol. V. 420 190 2012
[
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]
Hetero Components
(5, 8)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: ASCORBIC ACID (ASCa)
3a: 1,2-ETHANEDIOL (EDOa)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
ASC
1
Ligand/Ion
ASCORBIC ACID
3
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
4
GOL
2
Ligand/Ion
GLYCEROL
5
SO4
3
Ligand/Ion
SULFATE ION
[
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]
Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:39 , HIS A:49 , VAL A:51 , HOH A:1007 , HOH A:1014 , HOH A:1088 , HOH A:1108
BINDING SITE FOR RESIDUE SO4 A 901
2
AC2
SOFTWARE
GLU A:21 , GLY A:22 , SER A:78 , GLN A:79 , HOH A:1024 , HOH A:1095 , HOH A:1130
BINDING SITE FOR RESIDUE SO4 A 902
3
AC3
SOFTWARE
GLU A:91 , LEU A:103 , LYS A:114 , LEU A:117 , LEU A:176 , HOH A:1104
BINDING SITE FOR RESIDUE SO4 A 903
4
AC4
SOFTWARE
PHE A:34 , VAL A:72 , PRO A:73 , GLU A:85 , SER A:86 , ACT A:908 , HOH A:1008 , HOH A:1100 , HOH A:1107 , HOH A:1113
BINDING SITE FOR RESIDUE ASC A 904
5
AC5
SOFTWARE
ARG A:30 , ARG A:39 , LYS A:136 , HOH A:1014 , HOH A:1021 , HOH A:1088 , HOH A:1123
BINDING SITE FOR RESIDUE GOL A 905
6
AC6
SOFTWARE
TYR A:84 , CYS A:112 , ILE A:116 , LEU A:119
BINDING SITE FOR RESIDUE GOL A 906
7
AC7
SOFTWARE
GLU A:91 , GLU A:95 , LEU A:103 , LYS A:110 , LYS A:114
BINDING SITE FOR RESIDUE EDO A 907
8
AC8
SOFTWARE
SER A:32 , PHE A:34 , ASC A:904
BINDING SITE FOR RESIDUE ACT A 908
[
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SAPs(SNPs)/Variants
(5, 5)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_061231 (S32Y, chain A, )
2: VAR_029269 (S86C, chain A, )
3: VAR_016811 (A140D, chain A, )
4: VAR_024484 (E208K, chain A, )
5: VAR_026583 (A236V, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_061231
C
32
Y
GSTO1_HUMAN
Polymorphism
45529437
A
S
32
Y
2
UniProt
VAR_029269
S
86
C
GSTO1_HUMAN
Polymorphism
11509436
A
S
86
C
3
UniProt
VAR_016811
A
140
D
GSTO1_HUMAN
Polymorphism
4925
A
A
140
D
4
UniProt
VAR_024484
E
208
K
GSTO1_HUMAN
Polymorphism
11509438
A
E
208
K
5
UniProt
VAR_026583
A
236
V
GSTO1_HUMAN
Polymorphism
11509439
A
A
236
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: GST_NTER (A:22-101)
2: GST_CTER (A:106-230)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GST_NTER
PS50404
Soluble glutathione S-transferase N-terminal domain profile.
GSTO1_HUMAN
22-101
1
A:22-101
2
GST_CTER
PS50405
Soluble glutathione S-transferase C-terminal domain profile.
GSTO1_HUMAN
106-230
1
A:106-230
[
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]
Exons
(6, 6)
Info
All Exons
Exon 1.4a (A:3-12)
Exon 1.5b (A:12-48)
Exon 1.6 (A:48-122)
Exon 1.7 (A:123-155)
Exon 1.8 (A:156-191)
Exon 1.9d (A:191-241)
View:
Select:
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All Exon Boundaries
1: Boundary -/1.4a
2: Boundary 1.4a/1.5b
3: Boundary 1.5b/1.6
4: Boundary 1.6/1.7
5: Boundary 1.7/1.8
6: Boundary 1.8/1.9d
7: Boundary 1.9d/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.4a
ENST00000369713
4a
ENSE00001833010
chr10:
106014493-106014720
228
GSTO1_HUMAN
1-12
12
1
A:3-12
10
1.5b
ENST00000369713
5b
ENSE00001776578
chr10:
106014921-106015029
109
GSTO1_HUMAN
12-48
37
1
A:12-48
37
1.6
ENST00000369713
6
ENSE00000987654
chr10:
106019334-106019556
223
GSTO1_HUMAN
48-122
75
1
A:48-122
75
1.7
ENST00000369713
7
ENSE00000987655
chr10:
106022737-106022835
99
GSTO1_HUMAN
123-155
33
1
A:123-155
33
1.8
ENST00000369713
8
ENSE00000987656
chr10:
106025842-106025948
107
GSTO1_HUMAN
156-191
36
1
A:156-191
36
1.9d
ENST00000369713
9d
ENSE00001881019
chr10:
106027010-106027215
206
GSTO1_HUMAN
191-241
51
1
A:191-241
51
[
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]
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d3vlna2 (A:103-241)
2a: SCOP_d3vlna1 (A:3-102)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
GST C-terminal domain-like
(353)
Superfamily
:
GST C-terminal domain-like
(353)
Family
:
Glutathione S-transferase (GST), C-terminal domain
(263)
Protein domain
:
automated matches
(50)
Human (Homo sapiens) [TaxId: 9606]
(35)
1a
d3vlna2
A:103-241
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
Glutathione S-transferase (GST), N-terminal domain
(216)
Protein domain
:
automated matches
(7)
Human (Homo sapiens) [TaxId: 9606]
(4)
2a
d3vlna1
A:3-102
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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