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3VHX
Asym. Unit
Info
Asym.Unit (371 KB)
Biol.Unit 1 (186 KB)
Biol.Unit 2 (181 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF ARF6-MKLP1 (MITOTIC KINESIN-LIKE PROTEIN 1) COMPLEX
Authors
:
H. Makyio, T. Takei, H. Ohgi, S. Takahashi, H. Takatsu, T. Ueda, Y. Kanah H. W. Shin, H. Kamikubo, M. Kataoka, M. Kawasaki, R. Kato, S. Wakatsuki K. Nakayama
Date
:
12 Sep 11 (Deposition) - 16 May 12 (Release) - 19 Jun 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.81
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Small Gtpase, Gtp Binding, Flemming Body, Cytokinesis, Cell Cycle- Signaling Protein Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Makyio, M. Ohgi, T. Takei, S. Takahashi, H. Takatsu, Y. Katoh, A. Hanai, T. Ueda, Y. Kanaho, Y. Xie, H. W. Shin, H. Kamikubo, M. Kataoka M. Kawasaki, R. Kato, S. Wakatsuki, K. Nakayama
Structural Basis For Arf6-Mklp1 Complex Formation On The Flemming Body Responsible For Cytokinesis
Embo J. V. 31 2590 2012
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Hetero Components
(3, 9)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
2a: GUANOSINE-5'-TRIPHOSPHATE (GTPa)
2b: GUANOSINE-5'-TRIPHOSPHATE (GTPb)
2c: GUANOSINE-5'-TRIPHOSPHATE (GTPc)
2d: GUANOSINE-5'-TRIPHOSPHATE (GTPd)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
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No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
GTP
4
Ligand/Ion
GUANOSINE-5'-TRIPHOSPHATE
3
MG
4
Ligand/Ion
MAGNESIUM ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:22 , ALA A:23 , ALA A:24 , GLY A:25 , LYS A:26 , THR A:27 , THR A:28 , THR A:41 , THR A:44 , GLY A:66 , ASN A:122 , LYS A:123 , ASP A:125 , LEU A:126 , CYS A:155 , ALA A:156 , THR A:157 , MG A:185 , HOH A:186 , HOH A:193
BINDING SITE FOR RESIDUE GTP A 184
2
AC2
SOFTWARE
THR A:27 , THR A:44 , GTP A:184 , HOH A:193
BINDING SITE FOR RESIDUE MG A 185
3
AC3
SOFTWARE
ASP C:22 , ALA C:23 , ALA C:24 , GLY C:25 , LYS C:26 , THR C:27 , THR C:28 , THR C:41 , PRO C:43 , THR C:44 , GLY C:65 , GLY C:66 , ASN C:122 , LYS C:123 , ASP C:125 , LEU C:126 , CYS C:155 , ALA C:156 , MG C:185 , HOH C:204 , HOH C:210 , HOH C:211 , HOH C:212
BINDING SITE FOR RESIDUE GTP C 184
4
AC4
SOFTWARE
THR C:27 , THR C:44 , GTP C:184 , HOH C:210 , HOH C:211
BINDING SITE FOR RESIDUE MG C 185
5
AC5
SOFTWARE
ASP E:22 , ALA E:23 , ALA E:24 , GLY E:25 , LYS E:26 , THR E:27 , THR E:28 , THR E:41 , PRO E:43 , THR E:44 , GLY E:66 , LEU E:67 , ASN E:122 , LYS E:123 , ASP E:125 , LEU E:126 , CYS E:155 , ALA E:156 , MG E:185 , HOH E:201 , HOH E:204
BINDING SITE FOR RESIDUE GTP E 184
6
AC6
SOFTWARE
THR E:27 , THR E:44 , GTP E:184 , HOH E:201 , HOH E:204
BINDING SITE FOR RESIDUE MG E 185
7
AC7
SOFTWARE
ARG E:75 , HIS E:76 , PRO F:720 , ALA F:721 , SER F:722
BINDING SITE FOR RESIDUE GOL F 1
8
AC8
SOFTWARE
ASP G:22 , ALA G:23 , GLY G:25 , LYS G:26 , THR G:27 , THR G:28 , THR G:41 , THR G:44 , GLY G:66 , ASN G:122 , LYS G:123 , ASP G:125 , LEU G:126 , CYS G:155 , ALA G:156 , THR G:157 , MG G:185
BINDING SITE FOR RESIDUE GTP G 184
9
AC9
SOFTWARE
THR G:27 , THR G:44 , GTP G:184
BINDING SITE FOR RESIDUE MG G 185
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3vhxa_ (A:)
1b: SCOP_d3vhxc_ (C:)
1c: SCOP_d3vhxe_ (E:)
1d: SCOP_d3vhxg_ (G:)
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Protein Domains
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Organisms
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(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
ADP-ribosylation factor
(40)
Mouse (Mus musculus) [TaxId: 10090]
(3)
1a
d3vhxa_
A:
1b
d3vhxc_
C:
1c
d3vhxe_
E:
1d
d3vhxg_
G:
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CATH Domains
(0, 0)
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (371 KB)
Header - Asym.Unit
Biol.Unit 1 (186 KB)
Header - Biol.Unit 1
Biol.Unit 2 (181 KB)
Header - Biol.Unit 2
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