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Asym. Unit
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Asym.Unit (246 KB)
Biol.Unit 1 (240 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN ALLOSTERIC INVERSE-AGONIST ANTIBODY AT 3.1 A RESOLUTION
Authors
:
T. Hino, T. Arakawa, H. Iwanari, T. Yurugi-Kobayashi, C. Ikeda-Suno, Y Nakura, O. Kusano-Arai, S. Weyand, T. Shimamura, N. Nomura, A. D. Came T. Kobayashi, T. Hamakubo, S. Iwata, T. Murata
Date
:
04 Aug 11 (Deposition) - 01 Feb 12 (Release) - 15 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.10
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
7 Transmembrane Receptor, Signal Transduction, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Hino, T. Arakawa, H. Iwanari, T. Yurugi-Kobayashi, C. Ikeda-Suno, Y. Nakada-Nakura, O. Kusano-Arai, S. Weyand, T. Shimamura, N. Nomura A. D. Cameron, T. Kobayashi, T. Hamakubo, S. Iwata, T. Murata
G-Protein-Coupled Receptor Inactivation By An Allosteric Inverse-Agonist Antibody
Nature V. 482 237 2012
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 4-{2-[(7-AMINO-2-FURAN-2-YL[1,2,4]... (ZMAa)
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Select:
Label:
No.
Name
Count
Type
Full Name
1
ZMA
1
Ligand/Ion
4-{2-[(7-AMINO-2-FURAN-2-YL[1,2,4]TRIAZOLO[1,5-A][1,3,5]TRIAZIN-5-YL)AMINO]ETHYL}PHENOL
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:85 , PHE A:168 , GLU A:169 , MET A:177 , LEU A:249 , HIS A:250 , MET A:270
BINDING SITE FOR RESIDUE ZMA A 401
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_011835 (A50V, chain A, )
2: VAR_011836 (R300H, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_011835
A
50
V
AA2AR_HUMAN
Polymorphism
4530
A
A
50
V
2
UniProt
VAR_011836
R
300
H
AA2AR_HUMAN
Polymorphism
4990
A
R
300
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: G_PROTEIN_RECEP_F1_1 (A:90-106)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G_PROTEIN_RECEP_F1_1
PS00237
G-protein coupled receptors family 1 signature.
AA2AR_HUMAN
90-106
1
A:90-106
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Exons
(2, 2)
Info
All Exons
Exon 1.11k (A:6-111)
Exon 1.12d (A:111-308 (gaps))
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All Exon Boundaries
1: Boundary 1.6b/1.11k
2: Boundary 1.11k/1.12d
3: Boundary 1.12d/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.6b
ENST00000337539
6b
ENSE00002154423
chr22:
24823539-24823714
176
AA2AR_HUMAN
-
0
0
-
-
1.11k
ENST00000337539
11k
ENSE00002196114
chr22:
24829099-24829704
606
AA2AR_HUMAN
1-111
111
1
A:6-111
106
1.12d
ENST00000337539
12d
ENSE00002190439
chr22:
24836551-24838328
1778
AA2AR_HUMAN
111-412
302
1
A:111-308 (gaps)
198
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SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d3vgab1 (B:1-107)
2a: SCOP_d3vgab2 (B:108-212)
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Protein Domains
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Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Immunoglobulin
(5995)
Family
:
automated matches
(864)
Protein domain
:
automated matches
(864)
Mouse (Mus musculus) [TaxId: 10090]
(360)
1a
d3vgab1
B:1-107
Family
:
C1 set domains (antibody constant domain-like)
(3013)
Protein domain
:
automated matches
(652)
Mouse (Mus musculus) [TaxId: 10090]
(309)
2a
d3vgab2
B:108-212
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (246 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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